Ketobacter alkanivorans: Kalk_05725
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Entry
Kalk_05725 CDS
T05294
Name
(GenBank) sigma-54-dependent Fis family transcriptional regulator
KO
K02667
two-component system, NtrC family, response regulator PilR
Organism
kak
Ketobacter alkanivorans
Pathway
kak02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
kak00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Kalk_05725
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
kak02022
]
Kalk_05725
02035 Bacterial motility proteins [BR:
kak02035
]
Kalk_05725
Two-component system [BR:
kak02022
]
NtrC family
PilS-PilR (type 4 fimbriae synthesis)
Kalk_05725
Bacterial motility proteins [BR:
kak02035
]
Pilus system
Twitching motility proteins
Kalk_05725
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
AAA_lid_14
Sigma54_activ_2
HTH_8
HTH_50
AAA_5
HTH_30
AAA_16
HTH_28
HTH_23
AAA_19
Pre_tape_measure
DUF7661
Motif
Other DBs
NCBI-ProteinID:
AUM11951
UniProt:
A0A2K9LIE5
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All DBs
Position
1353373..1354752
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AA seq
459 aa
AA seq
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MSQYKALIVDDEPDIRELLDLTLSRMDIETFTAANIDSAHVALDQEKFDLCITDMNLPDG
NGIDLVKYIQANNPSLPVAVLTAYGSMETAITALKAGAFDFVSKPVDLQRLRDLVNTALK
LKFEKQEPATGETDSPILGTSPQVRKLQAQIKKLARSQAPVYISGESGSGKELVAKEIHR
LGPRTDGPFVPVNCGAIPNELMESEFFGHRKGSFTGAYEDKTGLFQAAQGGTLFLDEVAD
LPMQMQVKLLRAIQEKAVRPVGSQKELATDVRILSATHKDLAKLVEQGDFRQDLFYRINV
IQMSVPPLRERGEDIILLAKRMLQSLAQDWEMELPSLSPKAEAALQEYQFPGNVRELENI
LERAVTLCDDEVITPEHLQLPTDGTPVVKPIAGTSPDHAIPDFVEGDSLEEYLTDIEKQA
ILKALEETRWNRTAAAKKLGMSFRSLRYRLKKLGLDTDD
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgagccaatataaagcactaattgttgatgatgagcctgatataagggaactgctcgat
ctgacgctgtctcgaatggacatagaaacctttaccgcagccaatattgattctgctcat
gttgcacttgatcaggaaaaatttgatctctgcattaccgatatgaacctgccagatggc
aatggcattgatttagtgaaatacattcaagccaacaaccctagcttgccggtagctgtt
cttaccgcctatggcagcatggaaacggccattactgcgctgaaagcaggcgcctttgac
tttgtatccaaaccagtagatcttcaacgattgcgggatctggtaaacaccgctctcaaa
ttaaaatttgaaaaacaggagcctgccaccggcgagacagactcacccatattgggcaca
tcgccacaagtaagaaaactacaagcgcaaatcaaaaaattggcgcgcagccaggctcca
gtctatatcagcggagaatcaggaagcggcaaagagctggtggccaaagagatacaccgc
cttggccctcgcacagatggcccatttgttccagtgaattgcggcgccatccccaacgaa
ttgatggaaagcgaatttttcgggcaccgaaaaggcagcttcaccggcgcctacgaggac
aaaacaggcctatttcaagccgctcaaggtggcactctttttcttgatgaagtggcagac
ctgcccatgcaaatgcaggttaaactactgcgggcaattcaagaaaaagccgtgcgcccg
gtgggctcacagaaagaacttgccaccgatgtacgcatactgagcgccacccacaaagat
ctagccaaactggtggagcaaggggatttcagacaggatcttttctatcgcattaatgtc
atccagatgagcgttcctcccttaagagaaagaggagaagacatcatcttactggccaag
cggatgctgcaatcactggcccaggattgggaaatggaactgccaagcctgagcccaaaa
gccgaagccgcgttgcaagagtaccaatttcccggcaacgtgcgagagctggaaaatata
ttggaacgcgccgttaccctgtgtgacgatgaagtcatcacacccgagcacctgcaactg
cccaccgatggcacgccggtggtgaaacccatagcaggaaccagcccggatcatgccatc
cctgattttgtagaaggtgactctctagaagaatacctcaccgacattgaaaagcaggcg
atcctcaaagcactggaagaaacacgctggaaccgcactgcagcagcgaaaaagctcggt
atgagttttcgctcgctgcgctatcgtctgaaaaagctgggacttgataccgacgactag
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