Ketobacter alkanivorans: Kalk_06220
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Entry
Kalk_06220 CDS
T05294
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
kak
Ketobacter alkanivorans
Pathway
kak03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
kak00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Kalk_06220
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
kak03021
]
Kalk_06220
03400 DNA repair and recombination proteins [BR:
kak03400
]
Kalk_06220
Enzymes [BR:
kak01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Kalk_06220
Transcription machinery [BR:
kak03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Kalk_06220
DNA repair and recombination proteins [BR:
kak03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Kalk_06220
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
DUF22
Motif
Other DBs
NCBI-ProteinID:
AUM12040
UniProt:
A0A2K9LIG9
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All DBs
Position
complement(1465320..1466324)
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AA seq
334 aa
AA seq
DB search
MQRSVNEFLTPRTIGVQEINETHAKVTLEPLERGFGHTLGNALRRILLSSMPGAAVTEVE
IDGVVHEYSTLEGVQEDVIDILLNLKNLAVRLNEKSEALLSINKEGPGIVTAGDILLDHD
VEIMNKELVIANLSAGTKLNMKLRIQKGRGYEPADGRDSEEETRGVGRLQLDATYSPIRR
VAYVVESARVEQRTDLDKLVIDLETNGTIDAEDAIRRAATILQQQLAVFVDLEKESEPQK
VEERDEIDPILLRPVDDLELTVRSANCLKAENVYYIGDLVQRTEVELLKTPNLGKKSLTE
IKDVLASKGLSLGMRLENWPPGSLRDDERVLKKR
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atgcaacgctctgttaatgagtttttaacaccaaggactatcggtgttcaggaaattaac
gaaacccatgcaaaggtcacgttagaacctttggaaaggggcttcggacacactctgggc
aatgcgctgcgtcgtattttattgtccagcatgcctggggcagcagtaacagaagttgag
attgatggcgtagttcatgagtacagtacgcttgaaggtgttcaagaggacgttattgac
atcctgttgaacctcaagaatctcgctgttcgtttgaatgaaaaaagtgaagcattattg
agtatcaacaaggaaggtcccggcattgttaccgctggcgatattctgttggaccacgat
gttgagatcatgaacaaagagttggttatcgccaacttgagtgctggcaccaagctgaat
atgaagcttcgtattcagaagggtcgcggttatgagccagccgacggacgtgatagtgaa
gaagagacgcgtggcgttggtcgcctgcaactggatgcgacatattcgccaattcgtcga
gtagcctatgttgttgagagtgcgcgggtagagcagcgtaccgatctggataagctggtt
atcgatcttgagactaacggcactatcgatgcggaagacgctattcgccgagcggccact
attctgcagcagcaattggccgtgtttgtggatcttgagaaagagtcagagccgcagaag
gttgaagaacgcgatgagattgatccgattttgttgcgtccagtagatgatcttgagctt
accgttcgctccgcgaattgcttgaaagcagagaacgtttactatatcggtgacttggtt
cagcgtacagaagttgagttgctgaaaaccccaaacttgggtaagaagtcattgactgag
atcaaagacgtattggcgtctaagggcctttctctgggtatgcgcctcgaaaattggcct
cctggcagtctgcgtgatgatgagcgcgtactgaagaaacgttaa
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