Ketobacter alkanivorans: Kalk_06805
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Entry
Kalk_06805 CDS
T05294
Name
(GenBank) tRNA pseudouridine(55) synthase TruB
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
kak
Ketobacter alkanivorans
Brite
KEGG Orthology (KO) [BR:
kak00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
kak03016
]
Kalk_06805
Enzymes [BR:
kak01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Kalk_06805
Transfer RNA biogenesis [BR:
kak03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Kalk_06805
Prokaryotic type
Kalk_06805
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB-C_2
TruB_C_2
Pus10_C
Nrd1-Seb1_dom2
Motif
Other DBs
NCBI-ProteinID:
AUM12138
UniProt:
A0A2K9LIF9
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All DBs
Position
complement(1579036..1579959)
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AA seq
307 aa
AA seq
DB search
MAKRRNRGRAIDGVLVLDKPPGCTSNEILQRIKRMYGAAKAGHTGSLDPLATGVLPLCFG
EATKFSQFLLDADKAYVVKAKWGERTDTSDADGEVVERCSTDGLTQAALLPVLEQFTGEI
EQIPSMYSALKHNGQPLYKLARQGVEVERPARKVRIHSLELLEFDATHFSLAVSCSKGTY
VRNLVEDIAAAMGNLAHVVELRRTQAGPYTLEQAVTVETLSQVLDSGGHKALDELLLPLG
TSADHWPELELSESTAFYLRNGNPVQIPGAPVEGWVKMIGPNQEFIGVGEVLDDGKVAPR
RLISNSN
NT seq
924 nt
NT seq
+upstream
nt +downstream
nt
ttggcaaaacgacgaaatcgaggccgggccattgatggcgtattggtgctggataagcca
cctggctgtacctccaatgaaatcctgcaacggatcaagcgtatgtacggtgccgctaaa
gcagggcataccggcagccttgatccattagcgactggtgtattaccgctgtgttttggt
gaggcgaccaagttttcccagtttcttctggatgcagacaaagcctatgttgtgaaagca
aagtggggcgaacgcacagatacctctgatgctgatggcgaagtggtagagcgctgttct
accgatggcttgacccaggcagctttgctgccggtgttggaacagtttaccggggagatc
gaacagatcccttctatgtattcagccctcaagcataatggtcaaccactgtacaaattg
gctcgtcaaggtgtagaagtggagcgacctgcccgcaaggtacgcattcatagtctagaa
ttgctggagtttgatgcgacccatttcagtctggcggtttcgtgcagcaaaggtacctat
gtacgtaatcttgtggaagatattgctgccgctatgggtaacctggcgcatgtggtagaa
ttgcgccgcacacaagctgggccttatacgctggagcaggctgttactgtggaaacactg
tcgcaagtccttgattctggtggacataaggcactggatgagctgcttctgcctttgggt
accagtgctgatcactggccggagctggagctgtcggaatccaccgcgttttacctgcgt
aatggtaatcccgtgcaaataccgggtgcccctgtagagggctgggtcaagatgattggc
cccaatcaagagtttattggcgttggcgaggtgctggacgatgggaaagtggctccccga
cgcttaataagtaacagcaattag
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