KEGG   Ketobacter alkanivorans: Kalk_10335
Entry
Kalk_10335        CDS       T05294                                 
Name
(GenBank) DNA polymerase I
  KO
K02335  DNA polymerase I [EC:2.7.7.7]
Organism
kak  Ketobacter alkanivorans
Pathway
kak03030  DNA replication
kak03410  Base excision repair
kak03420  Nucleotide excision repair
kak03440  Homologous recombination
Brite
KEGG Orthology (KO) [BR:kak00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    Kalk_10335
   03410 Base excision repair
    Kalk_10335
   03420 Nucleotide excision repair
    Kalk_10335
   03440 Homologous recombination
    Kalk_10335
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:kak03032]
    Kalk_10335
   03400 DNA repair and recombination proteins [BR:kak03400]
    Kalk_10335
Enzymes [BR:kak01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.7  DNA-directed DNA polymerase
     Kalk_10335
DNA replication proteins [BR:kak03032]
 Prokaryotic type
  DNA Replication Elongation Factors
   Elongation factors (bacterial)
    Other elongation factors
     Kalk_10335
DNA repair and recombination proteins [BR:kak03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    DNA polymerase I
     Kalk_10335
   NER (nucleotide excision repair)
    GGR (global genome repair) factors
     Kalk_10335
SSDB
Motif
Pfam: DNA_pol_A 5_3_exonuc_N DNA_pol_A_exo1 5_3_exonuc DNA_polI_exo1 Prok-E2_E
Other DBs
NCBI-ProteinID: AUM12790
UniProt: A0A2K9LKL2
LinkDB
Position
2403146..2405854
AA seq 902 aa
MSSNKPLVLVDGSSYLYRAFHALPPLTNSKGLPTGAIKGVLNMLIRLRKDYAPAHMAVVF
DAKGKTFRDDLYPEYKANRPPMPDDLRSQIEPLHNAIRFMGLPLLIIEGVEADDVIGTLC
HIASKQGIDTIVSTGDKDMAQLVNDHVTLINTMNDSKMDRAGVIEKFGIPPERIIDYLTL
VGDSVDNIPGVPKCGPKTAVKWLEEFGCLENLLQNADSIKGKVGENLRASMEQIPLSKEL
ATIKLDVELEHQPSDLTIQEQDDANLLELYKDLEFKGWVAELSASADSSNSESTSTATAI
EQHYDCITTQEAFASWLQQLQACDAFAFDTETTSLNYMQAELVGVSFSIEPGRAAYVPVA
HDYPGAPDQLERDWVLQQLKPLLEAEQPKKIGQNLKYDKSVLAHYDVELKGIGYDTMLES
YVLDSTATRHDMDSLALKYLGHKNISFEEIAGKGAKQLTFNQIDLEKASEYAAEDADITL
RLHQALWPQLECEATLTHVFNDIEMPLVPLLSKIERTGALIDANMLRLHSQQLAKRMMEL
ETEAHDLAGGPFNLSSPKQLGEILFEKLGLPVISKTPKGAPSTAEPVLAELALEYELPKV
LMEYRGLSKLKSTYTDKLPELIDSRTGRIHTSYHQAVAATGRLSSSDPNLQNIPIRNEEG
RRIRQAFIPRTGCKLLAADYSQIELRIMAHLSGDDSLLNAFNQGLDIHKATAAEVMGVSL
DEVTHEMRRNAKAVNFGLIYGMSAFGLAKQLGIGRKQAQEYIDIYFTRYPGVQQYMENIR
EQAASQGYVETLFGRRLHLPEINSRNVQRRQAAERTAINAPMQGTAADIIKRAMIQVDDW
LVKKQLDTRIIMQVHDELVFEVPEQELDCITKEVTSLMQGAAELKVPLLVEVGVGDNWDQ
AH
NT seq 2709 nt   +upstreamnt  +downstreamnt
atgtcatccaacaaacctctagtgcttgtcgacggctcttcctacctgtatcgcgccttt
catgccctgccaccgctcaccaattccaagggtctgcccaccggcgcgatcaaaggcgtg
ctgaatatgctgatccgtctgcgcaaggattacgctcctgcgcatatggcggtagtgttt
gacgccaagggcaaaaccttccgcgatgatctttaccccgagtacaaggccaatcgtccg
cctatgcccgatgatctgcgctcacagatcgaaccactgcacaacgctattcgctttatg
gggctgccacttttaattatcgaaggtgtggaagccgatgacgtgatcggcaccctgtgc
cacatcgccagcaagcaaggtatcgacaccatcgtgtccaccggcgataaagatatggcg
caactggtgaacgatcatgtcaccctcatcaacaccatgaacgactctaaaatggatcgc
gctggtgtgatcgaaaagtttggcataccccctgagcgcatcattgattacctcacactg
gtgggcgacagcgtggacaatatcccaggcgtccccaagtgcggccccaaaaccgccgtc
aagtggctggaagaattcggttgcctcgaaaacctgctgcaaaatgccgacagcataaaa
ggcaaagtaggagagaacctgcgcgccagcatggaacagataccgctctccaaagaactg
gccaccatcaaactggatgtggaactggaacatcagccatcggatctcaccatccaggag
caggatgacgccaatttgttggagctgtataaagatctcgaatttaaaggctgggtagcg
gagctgtctgccagcgccgacagcagcaacagcgaatcaaccagcactgcgacagccatt
gaacagcactacgattgcattaccacccaagaagcctttgcaagctggctgcaacaactg
caagcctgcgatgcgtttgccttcgatacagaaaccaccagcctcaactatatgcaggct
gaattggtgggcgtgtctttcagcatagaacccgggcgggctgcctatgttcccgtcgcc
cacgattacccgggggcgccggatcagctggaacgcgattgggtgctgcaacagctcaaa
ccactgctggaagcagagcaacccaaaaaaatcggccagaaccttaagtacgacaaaagc
gtgctggctcactacgacgtcgaattaaaaggcatcggttacgacaccatgctggaatcc
tatgtactggattccactgccacccgtcatgacatggacagcctggccttgaaatacctg
ggccataaaaatatttcgttcgaagagatcgcaggcaaaggagccaagcagctcaccttt
aaccagatcgaccttgaaaaagccagcgagtatgcagcagaagatgccgacattacgttg
cgcttgcaccaggcactgtggccacaactggagtgcgaagctacgcttacccatgtattt
aatgatatcgaaatgccgctggtgccactgctatcaaagatagagcgcaccggtgcgctg
attgatgcaaacatgctgcgcctgcacagtcagcaattggccaagcgcatgatggagctg
gaaaccgaagctcacgatttggccggcggccccttcaacctcagctcgcccaaacaactt
ggcgaaatcctgttcgaaaaactgggcttaccggtcatatccaaaacccccaaaggtgca
ccttcaaccgccgaaccggtactggcagaactcgctctcgaatacgaactgcccaaagtg
ctgatggaatatcgtggcttaagcaaactgaaatccacctatacggacaaactacccgag
ctgatcgactcccgtaccgggcgcattcacacctcataccatcaggcggtagcggccacc
ggacgtttatcatcctctgatccaaacttacagaacatcccgatccgcaacgaagaaggc
cgccgcattcgacaagcgtttatcccccgcacaggctgcaaactgttggcggcggattac
tcacaaatagagctgcgtatcatggcccacctgtccggcgacgatagcttattgaatgcg
ttcaatcagggcctggacattcacaaagccaccgctgcagaagtcatgggtgtaagtctg
gacgaggtcactcacgaaatgcgccgcaacgccaaggccgttaacttcggtttgatttat
ggcatgtcggcgttcggcctggccaaacaactgggcatcggtcgcaagcaagcccaggaa
tacatcgacatttattttactcgctatcccggcgttcagcagtacatggaaaacattcgg
gagcaagccgccagccaaggttatgtggaaacgctgttcggccgtcgactgcatctgcca
gagatcaactcacgcaacgtgcaacgacgacaagcagcagagcgcaccgcgatcaatgcg
cccatgcaaggcaccgctgccgatattattaagcgcgccatgattcaagtggatgactgg
ctggttaaaaaacaactggatactcgcatcattatgcaggtacatgatgaattagtgttc
gaagttccggagcaagaattggactgcatcacaaaagaggtaacgtcactgatgcagggc
gctgcagaacttaaagttcccttgctagtggaggtcggggtaggtgataattgggaccaa
gcgcattag

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