Ketobacter alkanivorans: Kalk_12705
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Entry
Kalk_12705 CDS
T05294
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
kak
Ketobacter alkanivorans
Brite
KEGG Orthology (KO) [BR:
kak00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
kak03021
]
Kalk_12705 (rpoH)
Transcription machinery [BR:
kak03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
Kalk_12705 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
UCR_14kD
Sigma70_r1_2
Asp-B-Hydro_N
Motif
Other DBs
NCBI-ProteinID:
AUM13232
UniProt:
A0A2K9LLR7
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All DBs
Position
2974775..2975632
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AA seq
285 aa
AA seq
DB search
MSSALQPAFVTAPGVNLEAYVQSVQTVPVLSAEEEKTLAEKLFFDGDVDAARQLVLSHLR
FVVHIARSYNGYGLPQADLIQEGNVGLMKAVKRFDPTVGVRLVSFAVHWIKAEIHEYVLR
NWRIVKIATTKAQRKLFFNLRSQKKRLGWMNTDEINAIAADLGVNASDVREMEGRLGAYD
ASFDAPVDADDDSVGQAPVYFLEDSSMDPAVMLESDDWESSHNERLYQALTILDERSRDI
LQQRWFDDEKATLHDLAAKYEVSAERIRQLEKNAMKKLKAHMLEA
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgagtagcgcccttcaacctgcttttgtcaccgcacccggtgtcaacctggaagcctat
gtgcagtctgtacagaccgtaccggttttgagtgcagaagaagaaaagaccctggcagaa
aaattgttttttgacggtgatgtggatgcagctcgccagctggtattgtctcatctgcgc
tttgtcgtgcatatcgcccgctcttacaatggctacggtctgccccaggcggatctgatt
caggaaggcaacgtgggcttgatgaaagccgtaaaacgcttcgatcccaccgtaggtgtg
cgattggtgtccttcgctgtgcattggatcaaagccgaaattcacgaatacgtactgcgt
aactggcgcattgtgaagatcgccaccaccaaggctcaacgtaagctgttcttcaatttg
cgtagccagaaaaaacgcctcggctggatgaacaccgacgaaatcaacgccatcgccgct
gatttgggagtgaatgcttccgacgtgcgtgagatggaaggtcgtctgggtgcgtacgat
gcatcgtttgatgcgccagtggatgccgatgacgacagtgttggccaagcgccggtttat
ttcctcgaagacagcagcatggatccggctgtcatgctggaaagtgatgattgggaatct
tcccataacgaacgcctttatcaggccctcaccatactggatgagcgcagtcgcgacatt
ctgcagcagcgttggtttgatgatgagaaggccacattgcatgatcttgcggccaaatat
gaagtatcggcagagcgtattcgccaactggaaaaaaacgccatgaaaaagctaaaggcg
catatgctggaggcttaa
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