Ketobacter alkanivorans: Kalk_13130
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Entry
Kalk_13130 CDS
T05294
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
kak
Ketobacter alkanivorans
Pathway
kak03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
kak00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Kalk_13130 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kak03019
]
Kalk_13130 (recQ)
03400 DNA repair and recombination proteins [BR:
kak03400
]
Kalk_13130 (recQ)
Enzymes [BR:
kak01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Kalk_13130 (recQ)
Messenger RNA biogenesis [BR:
kak03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
Kalk_13130 (recQ)
DNA repair and recombination proteins [BR:
kak03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
Kalk_13130 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
HRDC
Helicase_C
RecQ_Zn_bind
ResIII
Motif
Other DBs
NCBI-ProteinID:
AUM13308
UniProt:
A0A2K9LLV7
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All DBs
Position
3070052..3071854
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AA seq
600 aa
AA seq
DB search
MKSAHSILEHVFGYDAFRGQQQAIIDTLIQGDDALVLMPTGGGKSLCYQIPALVRDGCGV
VVSPLIALMQDQVDALKAAGVNAGFLNSSLSMEQASEIEQALLNGELELLYVAPERLIQP
RCLNLLKRANISLFAIDEAHCVSQWGHDFRADYLQLSLLHEQFPHIPRVALTATADERTR
QEIAQRLDLQNAAHFVSGFDRPNIQYRIELKDKPRQQLLQFLRDEQAGNAGVIYCLSRNK
VEKTAEWLSDEGFNALPYHAGLPSELRAHHQQRFLREDGIIMVATIAFGMGIDKPDVRFV
AHLDLPKSIEAYYQETGRAGRDGEAATALLLYGLEDVVKLGQMAAGSDGNEQFKRLERQR
LEAMLGLCEITSCRRQTLLRYFGETLSEPCGNCDCCLQPPVTWDGSQVSQKLLSCVYRTG
QRFGANHVVDVLRGSTNEKVMQFKHDQLSTYGIGRDLSVNEWRAVVRQLVARGYLRVDAD
AYGALCLTERCRALLRGEEQIQLRKTPAKASAVGTRSRTVEIDEQDVPLWNALRACRKRL
AEEFGVPPYVVFHDATLREMVQQRPMSERTLLKISGVGDSKMERFGNAFLDVIRNHEYPE
NT seq
1803 nt
NT seq
+upstream
nt +downstream
nt
atgaaatcagcccactccattctagaacatgtatttggctacgatgcctttcgtggtcag
cagcaagccattattgataccttgattcagggtgatgatgccttggtgctgatgcccacc
gggggcggcaaatccctttgctatcaaattccggcgctggtacgggatggctgtggcgtg
gtggtctcgccattgattgccttgatgcaggatcaggtggatgccctgaaagcggctgga
gtgaacgctggttttctcaactcatcgctatcaatggagcaggccagcgagatcgagcag
gcgttgctgaacggtgagttggagctactctatgtggcacctgagcgccttatccagccc
cgctgcctgaacctgttaaagcgggcgaacatttcactgtttgccattgatgaagcccat
tgcgtgtctcaatgggggcatgattttcgggccgactatttgcagctgagcctgctgcac
gagcagtttccacatatcccccgggtagcgttgacggcgacggcagatgagcgtacccgc
caggaaatcgcccaacgcctggatctgcagaatgccgcacattttgtcagtgggtttgat
cgccccaatattcaatatcgcattgagttgaaggataagccgcgccaacagttactgcag
ttcctgcgggatgagcaggcaggtaatgccggggtcatctactgtctgtcgcgcaacaaa
gtggaaaaaaccgcagaatggttgagtgatgaaggcttcaacgcgttgccttatcacgcc
ggtttgccatctgaattgcgtgctcatcatcagcagcgtttcctgcgggaagacggcatc
atcatggtggccaccatcgcgtttggtatgggcatcgacaagccggatgtgcggtttgtt
gcacacctggatctgcccaaaagtatcgaagcctattatcaggaaaccggccgcgccggg
cgggatggtgaagcggccacagcattgcttttatatggcctggaagacgtggttaaactc
ggccagatggcggcgggctctgatggcaacgagcagttcaagcgtttagagcgacagcgt
ctggaagccatgctgggcctgtgtgaaatcaccagttgccgccgtcaaaccctgttgcgc
tattttggtgaaaccctgtccgagccctgtgggaactgtgattgttgcttgcaaccaccg
gtgacctgggatggctctcaggtatcacaaaagctgttgtcctgtgtgtaccgaaccggc
cagcgctttggtgccaatcacgtggtggatgtattgcggggcagcaccaacgaaaaggtg
atgcagtttaagcacgaccagctttccacatacggcattggccgtgatctgagtgttaat
gagtggcgggcagtggtacgtcagttggtggcgcgggggtacttgcgggtggatgccgat
gcctacggtgctttgtgcttaacggagcgctgccgggcgttgctgcgcggtgaagagcag
atccagttgcgcaagacaccggcgaaagcctctgctgtcggaacgcgttcgcgaacggtt
gaaattgatgagcaggacgtgccgttatggaatgcattgcgcgcctgtcgtaaacgattg
gcggaggagttcggtgtgccgccctatgttgtctttcatgatgctactttgcgtgaaatg
gtacagcagcgtcccatgagtgaacgcaccctgctgaaaatttccggtgtgggcgattcc
aaaatggagcgctttgggaacgcctttctggatgtgattcgcaatcacgaataccccgaa
taa
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