Kangiella aquimarina: SR900_00220
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Entry
SR900_00220 CDS
T09621
Symbol
thpR
Name
(GenBank) RNA 2',3'-cyclic phosphodiesterase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
kam
Kangiella aquimarina
Brite
KEGG Orthology (KO) [BR:
kam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
kam03016
]
SR900_00220 (thpR)
Enzymes [BR:
kam01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
SR900_00220 (thpR)
Transfer RNA biogenesis [BR:
kam03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
SR900_00220 (thpR)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LigT_PEase
2_5_RNA_ligase2
AKAP7_NLS
Corona_NS2A
Acb1
Motif
Other DBs
NCBI-ProteinID:
WQG85321
LinkDB
All DBs
Position
44911..45492
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AA seq
193 aa
AA seq
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MPSIAKSDKNMARLFFAIDLPQELKNQLELLQKMCPFSGRPVSPHNFHITLLFLGEVSRH
QLEDILEAIEIPAIKPFQIELNQFAYFPKAEVGCLEVAPSKQLIELHQHINRNLKQAGIH
IKQSSKPFRPHITLFRDATVQSEITQTVDFELGVDHFCLMESQFNQKGVYYEVIEEWPTY
EPTIKEQFFGIKD
NT seq
582 nt
NT seq
+upstream
nt +downstream
nt
atgccatctatagcaaaatctgacaaaaatatggctcgtctattctttgccatagaccta
ccccaggaactgaaaaaccagcttgagctgctacagaagatgtgtcctttttccggacgc
cccgtcagccctcataattttcatataacgctactgttcttaggagaggtttctcgacac
caactggaggatattctggaggctattgaaatccctgccattaaaccgttccagattgaa
ttaaaccaatttgcctactttccaaaagccgaagtaggttgccttgaagtcgctcccagc
aaacagctaatagagttgcatcagcatattaatcgcaacctgaaacaggctggtattcat
attaaacaatcgagcaagcctttcaggcctcatatcacactgttccgagatgctacagtt
cagtcagaaattacgcagactgtagattttgagcttggagtggatcacttctgtctaatg
gaatcgcaatttaatcagaaaggtgtttattacgaggttattgaagagtggccgacttat
gagccgaccatcaaagagcagttttttggtattaaagattaa
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