Kangiella aquimarina: SR900_00310
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Entry
SR900_00310 CDS
T09621
Symbol
pcnB
Name
(GenBank) polynucleotide adenylyltransferase PcnB
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
kam
Kangiella aquimarina
Pathway
kam03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
kam00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SR900_00310 (pcnB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kam03019
]
SR900_00310 (pcnB)
Enzymes [BR:
kam01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
SR900_00310 (pcnB)
Messenger RNA biogenesis [BR:
kam03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
SR900_00310 (pcnB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol_arg_C
PolyA_pol
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
WQG85339
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All DBs
Position
61073..62443
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AA seq
456 aa
AA seq
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MSSIIKSVKRWFASPAVESSGSSNRTQIISRDQHSISRKDISENALKVLYRLSNAGYESF
LVGGGVRDLLLGLHPKDFDIATNATPEQVKELFRNCRIVGRRFRLAHILFGRDVIEVATF
RAHCDDNIQQAKEGMILRDNVYGDIEEDAIRRDFTINALYYNIKDFSVYDYCDGLSDLRK
RQLRMIGDPETRYREDPVRMLRVVRLACKLDLSIEPKTLKPVSELSYLLEQVPAARLWEE
YRKLFLAGAGKLTFEKLREYGLFHALFPATDRSLKHDDTAQAQQTEQLILDALENTDTRI
ATEQTVNPAFLMAVMLWQPLLESTEALQQKGNNFNDAFFKSMARVLNAQSQHISIPRRYA
LVIRDIWSMQLRLPAHHGKKAWSIFEHPRFRAAYDFLLLRSQSDPRQLELANWWTKFQDA
DANARRQMLQQTGGGKKRRRRKPRNPKRQQASKNRH
NT seq
1371 nt
NT seq
+upstream
nt +downstream
nt
atgagttcaataattaagtccgtcaaacgttggtttgccagcccggccgttgaatcgtcc
ggctcgagtaaccgcacacaaatcatctcacgtgatcaacattcgatctcgcgtaaagat
atcagcgagaatgccctcaaggttctttatcggttaagcaatgctggttatgagtccttt
ctggtaggcggtggcgtgcgcgacttattgcttgggcttcaccccaaagacttcgatatc
gcgaccaatgcaacgcctgagcaagttaaggaactcttccgcaactgccgtattgttggt
cgccgttttcgattagcccatattttatttggccgtgatgtaatcgaagtggccaccttc
cgggcacactgtgatgacaacatccagcaggccaaagaaggcatgattctgcgcgataat
gtttatggcgatattgaagaagacgccatccgtcgtgacttcaccatcaatgcgctttac
tacaatatcaaagatttctcggtatacgactactgcgatggcctgtcggatttaaggaaa
cgtcaattacgcatgattggcgaccccgaaacccgctaccgcgaagacccggttcgcatg
ttgcgcgtggttcgactggcctgcaaactggatttatcgattgaacccaaaacacttaaa
ccggtttcggaactgtcttatctgcttgagcaggtaccagcagcccggctatgggaagaa
taccgcaaactgtttttggctggtgctggcaaactgacgttcgagaaactacgcgaatac
ggcctgttccatgccctttttcctgcaactgatcgttcgctcaagcatgacgatacagct
caggcgcaacaaacagagcaattgatccttgatgcattggaaaatactgatacccgtatt
gctaccgaacaaacggtcaatccagccttcctgatggcggtaatgctgtggcagcctttg
cttgagagcaccgaagctctgcaacagaaaggcaataactttaatgatgcttttttcaaa
agcatggctcgcgttctcaacgcgcaaagtcaacatatctctatcccacgtcgttacgcg
ctggtgattcgtgatatctggagtatgcagctacgcctgccagctcatcatggcaaaaag
gcctggagtattttcgagcacccgcgtttccgtgccgcatacgatttcctgttattgcgt
tcgcagtccgatccgcgacagctggaactagccaattggtggaccaaatttcaggatgct
gacgctaacgcccgtcgccagatgctgcagcagacaggtggtggcaagaaacgtagacgt
cgcaaaccgcgcaatcctaaacgtcaacaagcaagcaagaaccgtcattaa
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