Kangiella aquimarina: SR900_00525
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Entry
SR900_00525 CDS
T09621
Symbol
pnp
Name
(GenBank) polyribonucleotide nucleotidyltransferase
KO
K00962
polyribonucleotide nucleotidyltransferase [EC:
2.7.7.8
]
Organism
kam
Kangiella aquimarina
Pathway
kam03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
kam00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SR900_00525 (pnp)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kam03019
]
SR900_00525 (pnp)
03016 Transfer RNA biogenesis [BR:
kam03016
]
SR900_00525 (pnp)
Enzymes [BR:
kam01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.8 polyribonucleotide nucleotidyltransferase
SR900_00525 (pnp)
Messenger RNA biogenesis [BR:
kam03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
SR900_00525 (pnp)
Transfer RNA biogenesis [BR:
kam03016
]
Prokaryotic type
tRNA degradation factors
SR900_00525 (pnp)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_PH
PNPase
S1
RNase_PH_C
KH_1
S1_RRP5
KH-I_KHDC4-BBP
OB_RRP5_4th
KH_2
KH_NusA_2nd
Motif
Other DBs
NCBI-ProteinID:
WQG85381
UniProt:
A0ABZ0X460
LinkDB
All DBs
Position
complement(105713..107833)
Genome browser
AA seq
706 aa
AA seq
DB search
MEYTKKSFEYGGRTVTMETGRVARQATGAVVIDCEGTTAFVAVTGKKEAKEGQDFFPLTV
NYTEKTYAAGKIPGGFLKREARPSDEETLIARLIDRPLRPLFPEGFVNEVQIVITIVSIN
QDVPTEVVAMLGASAALEISGIPFNGPVGAAQVGYIDGEYVLNPSVTQLKNSKLDLMVAG
TESAVLMVESEADELPESVMLGAVMYGHQESQVAIKAIKEFAAEAAKPKWEWSAPEKNVS
LHDAVKNHSFAAIEEAYQIADKAERYAKIGELTDACVEALAGDEEGQPSADEVKDVFHAI
EKEVVRTRIISGKPRIDGRDPDMVRALDIRTGVFPRTHGSAIFTRGETQAMVFATLGTER
DAQIKDSIMGESKDHFMLHYNFPPYCVGETGFMGSPKRREIGHGRLAKRGVAAMVPGIAE
FPYTIRVVSEITESNGSSSMASVCGTSLALMDAGVPMKAPVAGIAMGLVKEADNFVVLSD
ILGDEDHLGDMDFKVAGTQDGITALQMDIKIEGITQEIMEQALHQAKGGRLHILSVMNQA
IDKPRDDISQYAPRITAIKIPVDKISEVIGKGGSTIRALTEETGATIEIEDDGTVKVASS
DAEGAAEAVRRIKLMTMPIEAGMEFEGKVVRLADFGAFVEITPGRDGLVHISQIAHERVN
KVTDYLKEGDVVKVKVLEVDRQNRIRLSMKALIDPPAQEEAPANAE
NT seq
2121 nt
NT seq
+upstream
nt +downstream
nt
gtggaatatacaaaaaaatcatttgaatacggtggccgtacggtcacgatggaaacgggt
cgtgttgctcgtcaagcgactggtgcagtagttattgactgcgaaggaacaacagctttt
gttgctgtaactggtaagaaagaagccaaagaaggtcaggatttcttccctttaacagta
aactatactgagaaaacatacgcagcgggtaaaatcccaggcggtttcttgaagcgtgaa
gcgcgtccttcagatgaagagactttaatcgctcgcctgattgaccgtcctttgcgtcct
ctattccctgagggttttgttaacgaagtacaaatcgttattacgattgtttcgattaat
caggatgtgccaaccgaggtggttgccatgttaggtgcttcagctgctttagaaatttca
ggcattccgtttaacggtcctgtcggtgcagcacaagtgggttacattgatggcgaatac
gtattaaacccatcggtaactcaactgaaaaattcaaaattggacttgatggttgccggt
acagaaagtgctgtgttgatggttgagtcagaagctgatgaattacctgaaagcgttatg
cttggtgcggtaatgtatggtcatcaggaatctcaggtagcaatcaaagcgattaaagaa
tttgctgcagaagctgctaaacctaaatgggaatggtcagctcctgagaaaaatgtttct
ctacacgatgctgtaaaaaatcattcttttgcagcaatcgaagaagcttatcaaattgct
gataaagctgagcgttatgccaagattggtgaattaaccgatgcttgtgtagaagcgtta
gcgggcgacgaagaaggtcagccttcagccgatgaagttaaagacgtgttccacgcgatt
gaaaaagaagtagttcgcacgcgcattatttctggtaagccacgtattgatggccgtgac
ccagatatggttcgtgcattggatattcgcactggcgttttccctcgcacacacggttca
gcaatctttacgcgtggtgaaactcaggccatggttttcgcgaccttgggtacagagcgt
gacgcacagataaaagacagcatcatgggtgagtcaaaagatcactttatgttgcactat
aacttccctccatactgtgtaggtgaaactggtttcatgggctcaccaaagcgtcgtgaa
attggtcacggtcgtttggctaagcgcggtgttgcagcgatggttccaggtattgctgaa
ttcccatacactatccgtgtggtatcagaaattactgaatctaacggctcaagctcaatg
gcatcagtatgtggtacttcactagcattgatggatgcgggcgtaccaatgaaagctcca
gtagctggtattgccatgggtctggttaaagaagctgataactttgttgtcttatcagac
atccttggtgatgaagatcacttgggtgatatggactttaaagtagcgggtactcaagac
ggtatcacagcactacagatggacatcaagatcgaaggcatcactcaggaaattatggag
caggcattgcatcaagcaaaaggcggccgtcttcatatcttgagtgtaatgaatcaggca
atcgacaagccacgtgatgacatctctcaatatgcaccacgtattactgccataaagatc
ccagtagacaaaatttcagaagtcatcggtaaaggtggttcaaccattcgcgccctgacc
gaagaaactggcgctaccattgaaatcgaagatgacggtacggtaaaagtggcttcatct
gatgcagaaggtgctgcagaagcagtgcgtcgcatcaagttgatgactatgccaattgaa
gcgggcatggagtttgaaggtaaagtggttcgtcttgcggacttcggtgctttcgttgaa
atcactcctggacgcgatggtctggttcatatttcacaaatcgctcatgagcgtgtgaat
aaagtaactgactacttgaaagaaggtgatgttgttaaagttaaagtactggaagtggat
cgtcagaaccgtatccgtttaagtatgaaagctttaattgatccacctgcgcaagaagaa
gctccagctaacgctgagtaa
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