Kangiella aquimarina: SR900_02045
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Entry
SR900_02045 CDS
T09621
Symbol
rho
Name
(GenBank) transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
kam
Kangiella aquimarina
Pathway
kam03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
kam00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SR900_02045 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
kam03021
]
SR900_02045 (rho)
03019 Messenger RNA biogenesis [BR:
kam03019
]
SR900_02045 (rho)
Transcription machinery [BR:
kam03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
SR900_02045 (rho)
Messenger RNA biogenesis [BR:
kam03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
SR900_02045 (rho)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
NACHT
OB_RNB
Fungal_virus_P2_C
AAA
AAA_25
S1CSD-TOTE-2
AAA_22
Spore_III_AA
Motif
Other DBs
NCBI-ProteinID:
WQG85677
UniProt:
A0ABZ0X5Z1
LinkDB
All DBs
Position
423965..425221
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AA seq
418 aa
AA seq
DB search
MNLTELKQKSAQELSEMAKAVGLDHMARMRKQDIIFGLLKNHAKSGEDIFGGGVLEILPD
GFGFLRSAEGSYLAGPDDIYVSPSQIRRFNLRTGDTIFGKIRPPKDGERYFALLKVAEIN
YDSPENSRNKLLFENLTPLHPDERMRMERGNGSTEDITARVIDLAAPIGKGQRALIVSPP
KAGKTMMLQNIAQSITSNHPECMLIVLLIDERPEEVTEMQRSVKGEVVASTFDEPAARHV
QVAEMVIEKAKRLVEHKKDVIILLDSITRLARAYNTVVPSSGKVLTGGVDANALQRPKRF
FGAARNIEEGGSLTIIATALVDTGSKMDEVIYEEFKGTGNMELHLSRKIAEKRVFPAIDF
NRSGSRKEDLLTSPEELQKMWILRKILHPMDEIDAIEFLIDKMAMTKTNDEFFDAMKR
NT seq
1257 nt
NT seq
+upstream
nt +downstream
nt
atgaatctaactgaattaaagcaaaagtcagctcaagagctgtctgaaatggcgaaagcc
gttggtctcgaccacatggcgcgtatgcgcaaacaggacatcatcttcggtctattaaag
aatcacgcgaaaagcggagaagatatttttggtggtggagtactcgaaatccttcccgac
ggttttggtttccttcgctcagcagaaggctcatacctcgctggtccagatgatatctat
gtttccccaagtcagataagacgctttaacctgcgaacgggcgatactattttcggcaaa
atccgcccaccgaaagacggtgaacgctattttgccctcctgaaagtcgcagaaatcaac
tacgacagccctgaaaactctcgcaacaaacttctctttgaaaaccttaccccacttcac
ccagacgaacgtatgcgtatggagcgtggtaatggttcgaccgaagacatcaccgctcga
gtgattgatttggcggctccaatcggtaaaggtcagcgtgctcttatcgtgtcgccacct
aaagccggtaaaaccatgatgttgcagaatatcgcgcagtcgattaccagcaaccaccca
gaatgcatgctgatcgttctactgatcgatgaacgaccagaagaagtaaccgaaatgcag
cgttcggtaaaaggtgaagtcgttgcttcaacctttgatgagccagcagcccgtcacgtc
caggtagccgaaatggttatcgaaaaagccaaacgtctggtcgagcataaaaaagacgtc
attattctgctggattcgattacccgtttagcgcgtgcctacaacaccgtagtgccatca
tccggtaaagtattaaccggtggtgttgacgccaacgcattacagcgtccaaaaagattc
ttcggtgctgcacgaaatatcgaagaaggcggcagcttaaccattatcgctactgcacta
gtcgataccggctccaaaatggacgaagtgatctacgaagagttcaaaggtaccggtaac
atggaattgcacctgtcgcgcaaaattgccgagaagcgtgtcttcccagccatcgacttc
aaccgctcaggttcgcgtaaagaagatctgctgaccagcccagaagagctgcaaaaaatg
tggatcctacgtaagattctccatccaatggatgagatagatgcgattgaatttttgatc
gataagatggcgatgacgaagacaaatgacgaattcttcgacgccatgaaaagataa
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