Kangiella aquimarina: SR900_02160
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Entry
SR900_02160 CDS
T09621
Symbol
rpoH
Name
(GenBank) RNA polymerase sigma factor RpoH
KO
K03089
RNA polymerase sigma-32 factor
Organism
kam
Kangiella aquimarina
Brite
KEGG Orthology (KO) [BR:
kam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
kam03021
]
SR900_02160 (rpoH)
Transcription machinery [BR:
kam03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
SR900_02160 (rpoH)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r2
Sigma70_r4
Sigma70_r1_2
KORA
HTH_Tnp_ISL3
UCR_14kD
HTH_10
HTH_3
GntR
HSCB_C
Motif
Other DBs
NCBI-ProteinID:
WQG85700
LinkDB
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Position
complement(445985..446836)
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AA seq
283 aa
AA seq
DB search
MSNIPMNMALAVPTGSIDGYISTVSAIPVLSVEEEQKLAHQFHDHNDLEAARQLVMAHLR
FVVHIARSYSGYGLPQADLIQEGNIGLMKAVKRFDPSVGVRLVSFAVHWIKAEIHEYVLR
NWRIVKVATTKAQRKLFFNLRSKKKTLNWLNNDEINAVAQDLGVSEEEVRRMEGRLNAHD
ASFDAPHASDDDDAVYAPVHYLESPNSDPAVAIEQEDWQDQRETRLLSALKTLDERSQDI
LQQRWLNDQKATLHDLADKYGVSAERIRQLEKNAMNKIKNAIS
NT seq
852 nt
NT seq
+upstream
nt +downstream
nt
atgagcaatattccaatgaacatggcgttagccgttccaacaggcagtattgatggttat
atcagtaccgtcagtgctattcctgtcctttccgttgaagaagaacaaaaattagcccat
cagtttcatgatcataatgaccttgaagctgctcgccagttagtaatggctcacttacgt
ttcgtcgttcatattgctagaagttacagtggttatggtttgccacaggccgatttaatc
caagaaggtaatattggcctgatgaaagccgttaagcgctttgaccctagcgtcggggtg
cgtctggtatcctttgcagtccactggattaaagccgaaattcacgaatatgtattgcgt
aactggcgtattgtcaaagttgcgacaaccaaagcacaacgtaaattgttcttcaatctt
cgctctaaaaagaaaaccctaaactggcttaataatgatgaaatcaatgccgtagcacag
gatttaggggtaagcgaagaggaagtcagacgaatggaagggcgcttgaatgcccatgac
gcttcctttgatgcaccacatgccagcgacgatgacgatgcagtatatgctccggttcat
tacctggagtcaccaaactctgatccggcggtagcgattgagcaggaagattggcaagac
caacgtgaaactcgactactatctgctctgaaaactctggatgaaagaagccaggatatc
ctgcaacagcgttggctaaatgaccaaaaagccactttgcatgatttggcagataaatat
ggtgtttcagcagagcgtattcgtcagctggagaaaaatgccatgaataaaatcaagaat
gctattagttaa
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