Kangiella aquimarina: SR900_05220
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Entry
SR900_05220 CDS
T09621
Name
(GenBank) LysM peptidoglycan-binding domain-containing protein
KO
K08307
peptidoglycan lytic transglycosylase D [EC:
4.2.2.29
]
Organism
kam
Kangiella aquimarina
Brite
KEGG Orthology (KO) [BR:
kam00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
kam01011
]
SR900_05220
Enzymes [BR:
kam01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
SR900_05220
Peptidoglycan biosynthesis and degradation proteins [BR:
kam01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
SR900_05220
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Gene cluster
GFIT
Motif
Pfam:
LysM
SLT
LysM3_LYK4_5
LysM1_NFP_LYK
LysM_RLK
HTH_23
LysM_OapA
SLT_2
Motif
Other DBs
NCBI-ProteinID:
WQG86288
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Position
complement(1106582..1108132)
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AA seq
516 aa
AA seq
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MPMKRLLLISCLGLTACSTLVKQEDTVNDPRFDNPQTTEDGSPLPAPELDNNNPLLLSDS
EVAPFVPNLWEHLASEQSFANVQHPRIDAFREQYLKSPHLLLKRADKAAPYLYYIITELE
NRNMPVELAFTPMVESNFDPLAHSVVQAAGMWQFMPKTAKGFGITIDEWYDGRRDIVAST
HAALDYYQYLNKMFDGDWLLTVAAYNVGPGNVMKAIRANKRQGKPTDYWSLKLPKETMRH
IPKWLALSDIFLNAPKYQVDLPLIDNQPAFVEVEVDAPANLMELAKIAQIDKDTFYRLNP
AYNRLFVPEHHKKATILVPVETVDHFNQGLLEIDPKQLMASVSYKVKSGDNLSLIAKRHN
TSVKTIKQLNGLKSDFLKIGQELKMPGIINATEYEKNFFATLSKNQQRRRYQVYNVRSGD
SLWTIAKKFGVSTRQLANWNGIAQNSTIRIGQKLKVWPRGYANYASNKSSYQVKSGDSLY
TIARRFNVKVSDLTKWNGLKNASLIKPGQTLTIYSK
NT seq
1551 nt
NT seq
+upstream
nt +downstream
nt
atgcctatgaagcgcttgctattgataagttgtttgggtttaacggcctgtagtaccctt
gtaaaacaagaagatacagtcaatgaccctcgttttgataatccacagacgaccgaggat
ggaagcccgttacccgctcctgagctggataacaacaatccattattactgtcagattca
gaggttgcaccttttgttcctaacttatgggaacacctggccagcgaacaaagttttgcc
aatgtccagcacccacgcattgatgcctttagagaacaataccttaagagcccacatctg
cttctaaagcgcgcagataaagcggcgccctacctgtactacatcattactgaacttgag
aaccgtaatatgcctgtcgagttagcttttacccctatggtagaaagtaatttcgatccc
ttggcacactcagtcgttcaggctgctggaatgtggcagtttatgcctaaaacagcgaag
ggctttggtatcacaatcgatgaatggtacgacggccgccgtgacattgtagcgtctacc
catgccgcattagattactaccagtatcttaacaaaatgtttgatggagattggttactg
actgttgccgcttacaatgtaggtccgggtaatgtgatgaaggccattcgtgccaataag
cgccaaggcaaaccaaccgactattggtcacttaaactacctaaagaaaccatgcgccat
ataccaaagtggttggcactgtcggatattttcctgaatgcgcctaaataccaggttgat
ttacccttaatcgataaccagccggcctttgttgaggtagaagttgatgctccagcaaac
ttaatggagctggctaagattgcacaaattgacaaagatactttttatcgcctgaaccct
gcctataaccgtttgttcgtacctgaacaccataaaaaggcgactattttggtccctgtg
gaaacagtggaccatttcaaccaggggcttctagaaattgatcccaagcagctgatggct
tcagtaagctataaagtgaaatctggagataacctgagtcttatcgctaagcgacataat
acttcggttaaaaccattaagcagttaaatgggcttaaatcggattttctaaaaatcggt
caggaattaaaaatgcccggcattatcaatgccactgagtatgaaaaaaacttctttgca
acattgagcaaaaaccagcagcgacgtcgctatcaggtatataacgtgcgctccggtgat
agtctgtggaccattgccaaaaagtttggggtgagtacacggcaactggctaactggaat
ggaattgctcaaaacagcaccattcgtatcggccagaagttaaaagtttggcctcgcggt
tatgccaattatgcatcgaacaaaagctcataccaggtcaaaagtggagactcgttgtac
accattgctcgacgcttcaacgtcaaggtcagtgatttaaccaaatggaatggcttaaaa
aatgcctctttaatcaaaccgggacagacgctgacaatttacagcaaatag
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