Kangiella aquimarina: SR900_05385
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Entry
SR900_05385 CDS
T09621
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
kam
Kangiella aquimarina
Pathway
kam03030
DNA replication
kam03430
Mismatch repair
kam03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
kam00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
SR900_05385 (dnaE)
03430 Mismatch repair
SR900_05385 (dnaE)
03440 Homologous recombination
SR900_05385 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
kam03032
]
SR900_05385 (dnaE)
03400 DNA repair and recombination proteins [BR:
kam03400
]
SR900_05385 (dnaE)
Enzymes [BR:
kam01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
SR900_05385 (dnaE)
DNA replication proteins [BR:
kam03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
SR900_05385 (dnaE)
DNA repair and recombination proteins [BR:
kam03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
SR900_05385 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
DNA_pol_IIIA_C
HROB
Stn1
Motif
Other DBs
NCBI-ProteinID:
WQG86319
LinkDB
All DBs
Position
1138030..1141515
Genome browser
AA seq
1161 aa
AA seq
DB search
MTPRFVHLKMHTEYSMVDSVVRVKPLIAHCKEQNIPAIAMTDQMNMCGLVKFYSQSVSAG
IKPIAGADLLIQNPNDEDDHFRVTALCMNNTGYLNLKYLISRAYLKNQHRGLPLAKKEWL
PEFAEGLIILSGGRQGDVGKALLAGNMDQAASNLGFWNHHFKDRFYLELQRTGRPQENEY
IHQVIGLAQGASTPVVATNDVRFLHKEDFDAHEARVCINQGRVLADPRRPRDYSEQQYLR
SEAEMVELFEDIPEALENSVEIAKRCNLDMRLGEYFLPEFPIPEGMTIEQYFEKVSKDGL
EERLDQLYDRNAENFAEIRKEYDERLQIELDVINQMGFPGYFLIVADFIQWSKNNGVPVG
PGRGSGAGSLVAYAMKITDLDPLEYDLLFERFLNPERVSMPDFDVDFCMEGRDRVIDYVA
ERYGRNSVSQIITFGTMAAKAVIRDVGRVLSHPYGFVDKLAKLIPFEVGMTLEKAFEQEP
ELPRLYEEDEDVREMWDLARKLEGVTRNAGKHAGGVVIAPNDLEEFAPLYCDETGHNIVT
QFDKDDVESAGLVKFDFLGLRTLTIIDWALETANAIIAKKGEDPIDIAKIDTEDQQVFDL
LQRADTTAVFQLESRGMKDLIKRLKPNRFEDIIALVALFRPGPLQSGMVDNFINRKHGRE
KVSYPDPHYQHESLKEILEPTYGIILYQEQVMQIAQVLAGYTLGGADILRRAMGKKKPEE
MEKQRSIFKEGSIKNGVDGDLAMKIFDLVEKFAGYGFNKSHSAAYALVAYQTAWLKTHHP
AAFMAAVMSSDMDNTDKVVTYVEDAQNSGLTITPPDVNKGQYRFSVDEEGRIVYGIGAIK
GVGEGAIESIVKEREANGPYKDLFDFCSRVDLKKANRRTLEALIRAGAMDLIGPNRATLM
ASLDEAVKAAEQFNKSQAAGQDDLFGSVVTTTATEQHQYIRVKPWTDEQVLQGEKETLGL
YLTGHPIDRYIPEIKQMSITRLRDLQPTGRGNSARVVGLIVGMRVMNTKRGDKMAILTLD
DKSGRCDVTVYAETFETYRHLLSRDNVIVVDGEARHDDYSGGTSVSANSVMSFEQAREQY
CKKIVITISDSIIGPDTMVELEEKISQNRDGACPVIINFQYQQKQIAGDFVMSEDWCVQP
VDSLVFSLKHIPGCVDARVEY
NT seq
3486 nt
NT seq
+upstream
nt +downstream
nt
atgacgccacgctttgttcaccttaaaatgcataccgaatactctatggtggatagtgtg
gtgcgggttaagccactgatcgcgcattgtaaggaacagaatattccggcaatcgccatg
accgatcagatgaacatgtgtggcctggtcaagttctattcccagtcagtatccgcgggc
ataaagccgatagcaggcgctgacttattaattcagaatcctaatgatgaggacgaccat
tttcgtgtcacggctttgtgcatgaacaataccggttacctcaatctcaagtatcttatt
tctcgtgcctaccttaaaaaccagcatcgtggtttacctcttgcaaaaaaagaatggcta
cccgagtttgccgaagggctcattattctttccggcggacgtcaaggggatgtaggtaag
gcactccttgctggcaatatggatcaggcagcatcaaacctgggtttctggaatcatcat
tttaaagatcgcttctatctggagctgcagcgtactggtcgtccacaagaaaatgaatac
attcatcaggtgataggtttagcgcaaggcgctagcacacctgttgtggctactaacgat
gtgcgattcctgcacaaagaagatttcgatgcccatgaggctcgtgtgtgcattaaccag
ggacgtgttctcgctgaccctcgtcgtccaagagactacagtgagcagcaatatttgcgc
agcgaagccgaaatggttgagctgtttgaagatattccagaagcgctagaaaacagtgta
gaaattgccaagcgctgtaatttggatatgcgtctaggcgagtacttcctgccggaattc
cccattcctgaaggcatgaccattgaacagtactttgagaaggtctccaaagacggcctc
gaagaacgacttgaccaattgtatgaccgcaatgcagagaactttgcagaaatccgcaag
gaatatgatgagcgtttacagattgagctagacgttattaatcaaatgggattcccgggc
tacttcctgatcgttgccgactttattcaatggtccaaaaataatggcgtaccggttggc
cccggccgtggttccggtgccggttccttagtggcctatgccatgaagattaccgatctt
gatccactggaatacgacctgcttttcgagcgattcctgaatcctgaacgtgtatcgatg
cccgactttgacgtcgacttctgtatggaaggacgcgatcgagtcattgattatgtggcc
gaacgttacggccgaaacagtgtttcgcagattattaccttcggtactatggccgccaag
gcggttattcgtgacgttggtcgtgtactgagtcatccttacggtttcgtcgataagctg
gccaagttgattcctttcgaagtagggatgacgctggaaaaagcatttgagcaggaacca
gaattaccacgcttgtacgaagaagatgaagacgttcgtgagatgtgggatttggcgcgt
aagttggaaggcgtcactcgaaatgccggtaagcacgccggtggtgtggttatcgcaccg
aatgatctggaagagtttgcgccgctgtattgcgatgaaactggtcacaatattgttact
cagtttgataaagacgatgtggaaagtgccggtctggtcaagtttgactttttgggtcta
agaaccctgaccattattgactgggcacttgaaacggccaacgccattatcgccaagaaa
ggcgaagacccaatcgatattgcgaagattgataccgaagatcagcaggttttcgatttg
ctgcaacgcgcagataccacagcagttttccagcttgaatcacgcggtatgaaggatctg
attaagcgtcttaaaccaaaccgttttgaagacattatcgcactggttgctctgtttcgt
ccgggtccgttgcagtcaggtatggttgataacttcatcaatcgtaaacacggacgcgag
aaagtttcttacccagatcctcattatcaacatgaatccctaaaagaaattctcgaaccg
acctacggcatcatcctctatcaggagcaggtgatgcagattgctcaggttttggctggt
tatacgcttggcggcgcggatattttgcgtcgtgccatgggtaagaaaaagcccgaagag
atggagaagcagcgtagtatcttcaaagaaggctcgatcaagaatggtgttgatggcgat
ctggccatgaagattttcgacctggtagaaaaattcgccggttatggtttcaataagtcg
cattcggctgcttatgcattagtagcgtatcagaccgcatggctgaaaacgcatcatccg
gcagccttcatggctgcggtaatgtcctccgatatggataataccgacaaggttgttacc
tatgttgaagatgcgcagaacagcggactaaccattacgccgccagatgtgaacaaaggg
cagtaccgtttctcggtggatgaagaaggtcgtatcgtctatggaatcggtgccattaaa
ggagttggtgagggtgctatcgaaagcatcgtcaaagaacgtgaagccaatggcccatac
aaagacctgttcgatttctgtagtcgagttgacctgaaaaaagccaaccgccgtacttta
gaagccttgattcgtgctggcgcgatggaccttatagggccgaatcgcgcaacgttgatg
gcttcgctcgatgaggcggtaaaagctgctgagcagtttaataaaagccaggcagcaggg
caggacgacttgtttggaagcgtcgtcaccacaaccgccaccgaacagcatcaatatatt
cgtgttaagccgtggactgatgaacaggttctgcaaggcgaaaaagaaacattgggatta
tacctgacaggtcacccaatcgatcgttacattccagaaattaaacaaatgagcattacc
cgactgcgtgacctgcaaccaaccgggcgtggtaattcagcaagagtggtaggcttgatt
gttggcatgcgcgtcatgaatactaagcgcggcgataaaatggcgattctcactttggac
gataagtccggtcgttgtgatgtcacagtctatgctgaaacttttgaaacctaccgccat
ttattgagccgcgataatgtcattgtggttgatggcgaagcgcgccatgatgattattct
ggcggcaccagcgtcagcgctaatagcgtcatgtcatttgaacaggcgcgagaacaatac
tgcaaaaaaatcgtcatcaccatctccgactccatcatcggcccagacaccatggtcgag
cttgaagaaaaaatcagccaaaaccgcgacggcgcctgcccagtaattatcaacttccag
taccaacaaaaacaaatcgccggtgatttcgtcatgagcgaagactggtgcgtacagcca
gttgattcattagtgttcagcctcaaacacatccccggctgtgttgatgcaagagtggag
tattag
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