Kangiella aquimarina: SR900_07745
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Entry
SR900_07745 CDS
T09621
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
kam
Kangiella aquimarina
Brite
KEGG Orthology (KO) [BR:
kam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
kam03016
]
SR900_07745 (rnd)
Enzymes [BR:
kam01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
SR900_07745 (rnd)
Transfer RNA biogenesis [BR:
kam03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
SR900_07745 (rnd)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
RNAseD_HRDC_C
DNA_pol_A_exoN
Motif
Other DBs
NCBI-ProteinID:
WQG84356
LinkDB
All DBs
Position
1639429..1640583
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AA seq
384 aa
AA seq
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MARFHLDQHQDSVHVETVLSTERLEELCQTWRKLDVLSVDTEFDRTNTYFHRLALIQIYD
GQEIYLIDPLAFEDISALEEIFKSTSIVKAFHSCSEDLEALYHQYGFEFNQVFDTQIAAS
IDGIGLSVGYGNIVEHFLSIVLDKEHTKTDWLQRPLSQEQKVYAAQDVQYLLPVYYRLRD
SLLEKGLFECVIEDVNSMFAAIIQADDYSETYLKVKGAFRLNRFQLNRLQRLAQWRETVA
RDNNIPKTFVFRDHHLIEVCQKEKTNISDLLSMGCNRGSIRRYGAELIRQIELADQIDES
KWPESLQPFHKIPKSKKMFAALKAEVENVSKDHNIPTEALCNRRLIEYYIKMTLGYKGRP
NRFWNSWRQNLLEKPFKQAMQEFI
NT seq
1155 nt
NT seq
+upstream
nt +downstream
nt
ttggcacgatttcatttagatcagcatcaagattcagttcatgtagaaactgtgctttct
actgagcgtttagaagaactttgtcagacctggcgtaaacttgatgtcctctccgtagac
actgagtttgatcgtaccaatacctattttcatcgactggcgctaattcaaatttatgat
ggacaggaaatctatttgattgatccattagcatttgaagatatttccgcattagaagaa
atattcaaatcaacgtcgattgtgaaagcctttcatagttgcagtgaagatttggaagcg
ctttatcatcaatatggctttgagtttaatcaagtctttgatactcagatcgcagcttca
attgatggcattgggcttagcgttggttacggtaatatcgtagaacacttcctaagcatt
gtgctggataaagagcacactaaaactgactggttacaacgaccactctctcaagaacaa
aaagtttacgctgcacaggatgttcaatatttattgccggtttattatcgattacgcgat
agtctgttggagaaaggcttgtttgagtgcgtgattgaggatgttaacagtatgtttgca
gccatcattcaagccgacgattattcagaaacttacttaaaagtgaagggtgctttcaga
cttaatcggttccaactcaaccgtttgcaaaggttggctcaatggcgtgagacggtagcc
cgcgacaataatatccctaaaacttttgttttcagagatcaccatttaattgaagtctgc
cagaaggaaaagactaatatcagtgatctactttcaatggggtgtaaccggggaagtatc
agacgatatggtgcagaattaatacgtcaaattgaactcgcggatcagattgatgaatcc
aaatggcctgaatcgctgcagccgttccataagatacccaagagtaaaaaaatgtttgct
gcattaaaggctgaagtggagaacgtcagtaaagaccataatattccaaccgaggcttta
tgtaatcgtcgattgatcgagtattatatcaagatgaccttaggctataagggccggccc
aatcgattctggaatagctggcgtcagaacctgcttgagaagccatttaaacaggcaatg
caggaatttatttaa
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