Kangiella aquimarina: SR900_09170
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Entry
SR900_09170 CDS
T09621
Name
(GenBank) sigma-54 dependent transcriptional regulator
KO
K02667
two-component system, NtrC family, response regulator PilR
Organism
kam
Kangiella aquimarina
Pathway
kam02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
kam00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
SR900_09170
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
kam02022
]
SR900_09170
02035 Bacterial motility proteins [BR:
kam02035
]
SR900_09170
Two-component system [BR:
kam02022
]
NtrC family
PilS-PilR (type 4 fimbriae synthesis)
SR900_09170
Bacterial motility proteins [BR:
kam02035
]
Pilus system
Twitching motility proteins
SR900_09170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
HTH_8
Sigma54_activ_2
AAA_lid_14
FleQ
HTH_28
HTH_23
VpsR
HTH_50
MerR
Motif
Other DBs
NCBI-ProteinID:
WQG84631
UniProt:
A0ABZ0X219
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All DBs
Position
1969475..1970803
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AA seq
442 aa
AA seq
DB search
MNQNKPKVLVIDDEADIRHLLTMTLIQMGLDVSSSKDLTDAKKQLSEEQFHFCLTDLKLP
DGNGLDFVKYVRKQYPHMPIAVITAFGSTDNAIEAMKLGAFDFLAKPIDLSHLRQLLKHA
FKYVDGKQVEPQAPFTFLAGRSEAINKLREKMVKIRGSQAPIVIEGEKGTEKERLAQILH
EQSSRSDLAEVFLDCSSEDQEELEHLLFNKDEQHDCLLFQANNSTLILSNIQHLSIITQK
KLLHAIEQKKFPIESEHSDKPMDIRIIICTEKPLIDYVHTNQLRDDLFFRLNVIQLKIPS
ITQRLSDLDTLIDSYLEELSDGKKISAVARDVLKNYEFPFNYRELENILEKACALSESDT
IEASDLIMAQGDEIESTKPRQEQVKSGFSRGDLPLDQFIEKIEKAEIEKALNETRWNRTE
AAKLLGITFRTIRYKMKKLGIE
NT seq
1329 nt
NT seq
+upstream
nt +downstream
nt
atgaatcaaaataaacccaaagttctagtcattgacgatgaagcagatatcagacacctg
ctgacaatgacattaatccaaatggggcttgatgtttcaagcagtaaagatttgactgat
gctaaaaaacaactttctgaagaacaattccacttttgtcttaccgatctaaagttaccg
gatggaaacggtctcgactttgttaaatatgttcgaaagcaatatcctcacatgccaatt
gccgtaattactgcttttggaagtaccgataacgcaatcgaagcaatgaaactcggagcc
tttgatttcctggcaaaaccaattgacttatctcaccttcgccagttattaaagcacgca
tttaaatacgttgatggaaagcaggttgagcctcaggctcctttcacatttcttgctggc
agaagcgaagccataaacaaattaagagaaaagatggtcaagattaggggctcgcaagct
ccgattgttattgaaggtgaaaaaggaacagaaaaagagcgactggctcagatccttcat
gagcaaagctcacgctccgatctggcagaagtctttttggactgctccagtgaagatcag
gaagaacttgagcacttactctttaataaagatgaacagcatgattgcctgctgtttcag
gctaacaacagcactttaattttaagcaacatccaacacctttcaattataactcagaaa
aagttactgcatgcaatcgagcagaagaagtttcccatcgaatctgagcactctgataag
ccaatggatattcgcattataatatgcactgaaaagccattaattgattacgttcatact
aaccaattgagggacgacctcttctttaggttaaatgtgatacagctaaaaatcccgtca
atcactcaaagactatctgatttagatacattgattgatagttatctggaagagttatca
gatggcaaaaaaatcagcgctgttgccagagacgtcctgaaaaactatgagtttccattt
aactacagagaacttgaaaatatactggaaaaagcctgtgctctctctgaatcagatacc
atagaagcgtcagatcttattatggctcaaggtgatgaaatagaatcaactaagccacgt
caggaacaggtgaagtcaggttttagtcgcggtgaccttcctcttgatcaatttatcgaa
aaaattgaaaaggctgaaatagaaaaagccctcaatgaaacccgctggaatagaactgaa
gctgccaagctattaggcataacttttagaacgattcgttataagatgaaaaaactcggt
attgaatag
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