Kangiella aquimarina: SR900_10335
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Entry
SR900_10335 CDS
T09621
Name
(GenBank) tRNA pseudouridine(13) synthase TruD
KO
K06176
tRNA pseudouridine13 synthase [EC:
5.4.99.27
]
Organism
kam
Kangiella aquimarina
Brite
KEGG Orthology (KO) [BR:
kam00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
kam03016
]
SR900_10335
Enzymes [BR:
kam01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.27 tRNA pseudouridine13 synthase
SR900_10335
Transfer RNA biogenesis [BR:
kam03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
SR900_10335
Prokaryotic type
SR900_10335
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruD
Motif
Other DBs
NCBI-ProteinID:
WQG84858
LinkDB
All DBs
Position
complement(2226235..2227299)
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AA seq
354 aa
AA seq
DB search
MELKLYDWPRAYGAPLASATFRQQLSDFCVDEELRFEPSGEGAHHLLLIEKRNINTDIVC
HKLRRFAEVNTTDIGYAGKKDRFAIARQWFSVQLPLLKEIDWTEFNDDEVTVLKATRHDK
KLRIGAVKQNHFKITLRDIGFKEGADKNSLEQRIAKIQQHGFANYFGEQRFGRNGDNLAR
GVDLLLANKKLKNRNLQGLLFSAVRSFLFNQVVAKRIEAGQFSELLDGDYVQLDGSESGF
TVQDLSQELPRFTAKDIHPTAPMPGRGRSQVLAKAAEFESAVLEPFQPIIDALERKGLNG
ERRAIRVFPQNVILQWHNEQTLEMRFSLPKGAFATSLLRELFELNIDKPDTFND
NT seq
1065 nt
NT seq
+upstream
nt +downstream
nt
atggaactcaaactatacgactggcctcgagcctatggcgctcctttagcctcagcgact
tttcgtcaacagcttagcgacttttgtgtagacgaggagcttcgcttcgaaccttcggga
gagggcgcacaccatttactgctcatcgaaaagcggaatatcaatactgacatcgtgtgt
cacaaattacgtcgctttgctgaagttaatacaaccgatattggctatgcaggaaaaaaa
gatcgcttcgccattgccagacaatggttcagtgttcaattgcctttattaaaagagatt
gactggactgagtttaatgatgatgaagtgacagtcctgaaagcgacacgtcacgataaa
aagttacgcattggcgcggttaagcagaatcacttcaaaataacattacgtgatattggc
tttaaagaaggagcggataagaattcgcttgagcagcgaatagctaagatccagcaacat
ggtttcgccaattactttggtgagcagcgctttgggcgcaatggcgataacttggcgcgt
ggcgtcgatttattattggccaataaaaagctcaagaatcgaaacctacagggcctactc
ttttctgcggttcgctctttcctatttaatcaggttgttgctaaacgtattgaagcagga
caattcagcgaactgctggatggtgattatgtccagcttgatggctcagaaagtggtttt
accgttcaggacttatcacaggagttaccgcgctttaccgcaaaggatattcatcccaca
gcacccatgccgggtcgtggccgttcgcaggttttagcgaaagcagctgagttcgagagt
gctgttttggagccgtttcagccgatcattgatgcactggaacggaaaggtctcaatggg
gaacgacgtgccattcgtgtattccctcaaaatgtcatcttgcaatggcataatgaacaa
actcttgaaatgcgctttagtttgcccaagggagcgtttgctaccagtctgttgcgcgaa
ttatttgaactgaatattgataaaccagatacttttaacgattaa
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