Kangiella aquimarina: SR900_12530
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Entry
SR900_12530 CDS
T09621
Name
(GenBank) DEAD/DEAH box helicase
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
kam
Kangiella aquimarina
Pathway
kam03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
kam00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
SR900_12530
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kam03019
]
SR900_12530
03009 Ribosome biogenesis [BR:
kam03009
]
SR900_12530
Enzymes [BR:
kam01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
SR900_12530
Messenger RNA biogenesis [BR:
kam03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
SR900_12530
Ribosome biogenesis [BR:
kam03009
]
Prokaryotic type
rRNA helicases
SR900_12530
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
DeaD_dimer
ResIII
CMS1
AAA_30
AAA_19
Cas3-like_C_2
bCoV_SUD_C
Motif
Other DBs
NCBI-ProteinID:
WQG85282
UniProt:
A0ABZ0X3V9
LinkDB
All DBs
Position
2685000..2686793
Genome browser
AA seq
597 aa
AA seq
DB search
MTQNQTITSFDELGLSPAVLKSIKQVGYEQPSPIQSASIPVLMSGKDIIGQAQTGTGKTA
AFALPMLSKLDAKDSNTQLLVLAPTRELAIQVAEACQSYAKNMPGMNVLPIYGGQRYDTQ
LRQLKRGAQIVVGTPGRVMDHIRRGTLNLDNLKALVLDEADEMLRMGFIEDVEWVLGHTP
DTRQIALFSATMPKEIKKVAEKYLNEPEHIKIQSKTSTATTIDQRYWLVSGLHKLDALTR
VLETEEFDGMIIFVRTKIATIELADKLTARGFRAEALNGDIAQNARERIVEKLKKGQSDI
LIATDVAARGLDVERISHVVNYDIPYDTESYVHRIGRTGRAGRSGHAILFVAHRERRMLK
AIERATNQPITEMQMPSIENINEQRMSRFERKVLSTIETDDLNFFKQFVQKLEAKTDCEP
ETIAAALAKLAGGDELILKEMPKVKKERSDRPERGERRDRKSRDEGSKRGSDRSFSPYAQ
PLKAHPDIEMERFKIDAGHSHNVKVSNIVGAIANEAELDSEYIGRIDIFDEFTTVDLPSG
MPKEVLQILSKAHVAGRPMNLTVIGDQKSNKSSGKGDKKFKGKDKGKPKGKVGKSKK
NT seq
1794 nt
NT seq
+upstream
nt +downstream
nt
atgacacaaaatcaaacgatcaccagttttgacgaactggggctttctcctgccgtattg
aaatccataaaacaggtaggttatgaacaaccatcccctattcaaagtgccagtatccca
gttcttatgtccggtaaagatattattggccaggctcaaaccggaactggtaaaactgct
gcttttgctttacccatgctttcaaagctagatgcaaaagatagcaatacacaattatta
gttctggcccctacacgagaactcgccattcaggttgcggaagcttgtcaaagctacgct
aaaaatatgcctggaatgaatgtgttaccaatatatggcggccaacgttacgacacccag
ctaagacaattgaaacgcggtgcacaaattgttgtgggcacccctggtcgtgtgatggat
catatccgtcgcggcactctcaatctagacaacttgaaagcactagtacttgatgaagct
gacgaaatgctacgaatgggttttattgaagacgtagagtgggttcttgggcatacgcct
gatacccggcagatcgcccttttctcagcaaccatgcctaaagaaatcaaaaaggttgcc
gaaaaatatctcaatgaaccagagcatatcaagattcaatctaaaaccagtactgcaaca
actattgaccagcgctattggttagtcagcggactgcataaactggatgcacttacccgc
gtactggaaaccgaagaattcgacggcatgatcatctttgttcgtaccaaaattgcgact
attgaacttgccgacaaactgaccgccaggggctttagagctgaagcactaaacggagat
atagcccagaatgctcgtgaacgaattgttgaaaaattaaaaaaaggccagtcagatatt
ctaattgctacagatgtggcggctcgtggccttgatgtcgagcgtatcagccacgttgta
aactatgatattccttacgacaccgaatcttatgtacaccgtattggtcgtactggtcgt
gccggacgtagtggccatgccattttattcgttgctcaccgcgaacgtcgtatgctcaaa
gccattgaacgtgcaaccaatcagccaattactgaaatgcaaatgccaagcattgaaaac
atcaatgaacagcgcatgagcaggttcgaacgaaaagtgttaagtacaatagaaactgat
gacctcaatttctttaaacaatttgtgcagaaactagaagctaagaccgactgtgaacca
gaaacaattgctgcagcattagcaaagttagctggcggcgatgagctcatattgaaagaa
atgccaaaagttaaaaaagaacgctctgacagaccggaaagaggcgagcgtcgcgaccgc
aaaagtcgtgatgaaggctctaagcgtggcagtgacagaagtttttctccatatgcacaa
cctttaaaggcacatcccgacattgagatggaacgttttaaaatcgatgccggtcatagc
cataatgttaaagttagcaacatcgttggtgcaattgctaatgaagccgaactagacagc
gaatatattggtcgtattgatatcttcgatgagtttactacagttgatttaccatctggt
atgccaaaagaagttctacaaattttaagcaaagctcatgttgctggaagaccgatgaac
ctaactgttattggtgatcagaaaagcaataagtctagtggaaaaggcgacaaaaagttt
aaaggtaaagacaaaggaaagcctaaaggtaaagttggaaaatccaaaaagtaa
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