Kordia antarctica: IMCC3317_03770
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Entry
IMCC3317_03770 CDS
T06371
Symbol
lpxC
Name
(GenBank) UDP-3-O-acyl-N-acetylglucosamine deacetylase
KO
K16363
UDP-3-O-[3-hydroxymyristoyl] N-acetylglucosamine deacetylase / 3-hydroxyacyl-[acyl-carrier-protein] dehydratase [EC:
3.5.1.108
4.2.1.59
]
Organism
kan
Kordia antarctica
Pathway
kan00061
Fatty acid biosynthesis
kan00540
Lipopolysaccharide biosynthesis
kan01100
Metabolic pathways
kan01212
Fatty acid metabolism
Module
kan_M00083
Fatty acid biosynthesis, elongation
Brite
KEGG Orthology (KO) [BR:
kan00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
IMCC3317_03770 (lpxC)
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
IMCC3317_03770 (lpxC)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
kan01005
]
IMCC3317_03770 (lpxC)
01004 Lipid biosynthesis proteins [BR:
kan01004
]
IMCC3317_03770 (lpxC)
Enzymes [BR:
kan01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.108 UDP-3-O-acyl-N-acetylglucosamine deacetylase
IMCC3317_03770 (lpxC)
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.59 3-hydroxyacyl-[acyl-carrier-protein] dehydratase
IMCC3317_03770 (lpxC)
Lipopolysaccharide biosynthesis proteins [BR:
kan01005
]
Lipid A
IMCC3317_03770 (lpxC)
Lipid biosynthesis proteins [BR:
kan01004
]
Fatty acid synthase
Component type
IMCC3317_03770 (lpxC)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LpxC
FabA
ApeI-like
DUF2118
Motif
Other DBs
NCBI-ProteinID:
QHI35031
UniProt:
A0A7L4ZEZ8
LinkDB
All DBs
Position
411586..413007
Genome browser
AA seq
473 aa
AA seq
DB search
MSEIIVKQTTIAKEISLKGVGLHTGKEVLLTFKPAPENHGYAFMRVDLEGSPIIEADANY
VVNTQRGTVLEKRGVKIQTCEHVLAALVGLEIDNVLIEMDGSEPPIMDGSAKFFLEALEE
AGIVSQNEPREVYIVKDVISYIDEESGSEITIIPSDEYQVTTMVDFGTKVLGTQNATLKH
ISDFKNDIASSRTFSFLHELEMLLEHGLIKGGDLNNAIVYVDKELSPATMEKLRVAFGKE
NIAVKPNGILDNLTLHHPNEAARHKLLDVIGDLALVGVRIRGKVIANKPGHFVNTQFAKK
LSKLIKIEKRNKVPTYDLHQTPLMDINQIMAMLPHRPPFLLVDKILELSDTHVVGVKNVT
MNEPFFVGHFPGAPVMPGVLQVEAMAQTGGILVLSTVPDPENYLTFFMKIDKVKFKQKVV
PGDTLIFKADLITPIRRGICHMQAYAYANGKVVAEAELMAQIARKKEEDIVKK
NT seq
1422 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaaattattgttaaacaaacaaccatcgccaaagaaatatctttaaaaggcgtc
ggattacacacaggaaaagaagttttactaacctttaaacctgcaccagaaaatcatgga
tatgcttttatgagagttgatctcgaaggaagtccaatcattgaagcagacgcaaactat
gttgtcaacacacaacgcggaactgttttagaaaaaagaggcgtcaaaattcaaacctgc
gagcacgtattagcggcgttagttggtttagaaattgacaatgttctcattgaaatggac
ggatctgaaccgccaataatggatggttcggcaaaattctttctagaagcactggaagaa
gcaggaattgtgtcgcaaaatgagccaagagaagtatacattgtaaaagatgttatctca
tacattgatgaagaatctggaagtgaaatcaccatcattccttcggatgaatatcaagta
actaccatggttgactttggaaccaaagtacttggaactcaaaacgcaaccttaaagcac
atttctgatttcaaaaacgacattgcgagttcaagaacattcagtttcttacatgaacta
gaaatgttgctagaacatggtttaataaaaggtggcgacttaaataatgctattgtatat
gttgataaagaactatcaccagcaacaatggaaaaattaagagtagcttttggcaaagaa
aatattgcggtaaaaccaaacggaattcttgacaaccttacacttcatcatccaaacgaa
gcggcacgacacaaattactagatgtaattggcgatctagctttagttggcgttcgcatt
cgcgggaaagtaattgcaaacaaacccggacattttgtaaatacacaatttgcaaaaaaa
ctgtccaaactcataaaaatagaaaagcgcaacaaagtaccaacatacgatttgcatcaa
actcctttaatggacatcaatcaaatcatggcaatgttaccgcacagaccaccattctta
ttagtagataaaatattagaattatctgatacgcatgttgttggtgtaaaaaatgtaacg
atgaacgaaccatttttcgttggtcattttcctggcgcgcctgtaatgcctggcgtatta
caagtagaagcaatggcgcaaactggcggaatcttagtactaagtacagttccagatcca
gaaaactacctcactttcttcatgaaaattgacaaagtaaaattcaagcaaaaagtagtt
cccggagatacattgatattcaaagccgatttaatcacgccaattcgtagaggaatttgt
cacatgcaagcatatgcgtatgcaaatggaaaagtagtggcagaagcagaattaatggca
caaattgcacgaaaaaaagaagaagacattgtaaaaaaataa
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