Kordia antarctica: IMCC3317_03990
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Entry
IMCC3317_03990 CDS
T06371
Symbol
truA_1
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
kan
Kordia antarctica
Brite
KEGG Orthology (KO) [BR:
kan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
kan03016
]
IMCC3317_03990 (truA_1)
Enzymes [BR:
kan01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
IMCC3317_03990 (truA_1)
Transfer RNA biogenesis [BR:
kan03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
IMCC3317_03990 (truA_1)
Prokaryotic type
IMCC3317_03990 (truA_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
QHI35053
UniProt:
A0A7L4ZEB2
LinkDB
All DBs
Position
436631..437419
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AA seq
262 aa
AA seq
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MQRKRYYYLITLQYLGFRYHGWQKQPDVNTVQRMTERTLAYVFGHKNFKLLASGRTDAKV
SANEIAIELFLDNETLDIPAFLPVFNQNLPQDIRALAITETNEKFNIIQHPKVKEYIYLF
AFGEKYHPFSAPYMTNILGDLDVELMKKGAKLFEGNHYLKTYCYKPTEHTILQGEIELCE
IVKNEIYTANFFPEQSFVLRVQGAGFKRHQIRMMMGTLILLGKHELDLDFIERSLVPDST
LEVNYIAPASGLILNKMTFKDL
NT seq
789 nt
NT seq
+upstream
nt +downstream
nt
ttgcaaagaaaacgctattactatctcatcacgctacaatacttaggatttcgctatcat
ggttggcaaaaacaaccagatgtgaacacagttcagcgaatgacagagcgaacattagcg
tatgtatttggacataaaaacttcaaattattagcttctggtcgtaccgatgcaaaagtt
tcggcaaacgaaattgccattgaattatttcttgacaatgaaaccctcgatattcctgcg
tttttacctgttttcaatcaaaacttaccacaagacattcgcgcattagcgattacggaa
acgaatgaaaaattcaacatcattcagcatccgaaagtaaaagaatacatctatttattt
gcgtttggtgaaaaatatcatccgttttcagcgccatacatgaccaatattttgggcgat
ttagatgttgaattaatgaaaaaaggagcaaagctgtttgaaggaaatcactacttaaaa
acctattgctacaaacctacggaacataccattttacaaggagaaattgagttatgtgaa
atcgtgaaaaacgaaatctacacagcgaatttctttccagaacaaagttttgtattgcgt
gtgcaaggtgcaggattcaagcgacatcaaattcgcatgatgatgggaacattaatttta
ttgggaaaacacgaactcgatttagactttatcgaacgttcattagtaccagattctaca
ctagaagtcaactatattgcgccagcttctggtttgattttgaataaaatgacgtttaaa
gatttatga
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