Kordia antarctica: IMCC3317_13490
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Entry
IMCC3317_13490 CDS
T06371
Symbol
dnaX_1
Name
(GenBank) DNA polymerase III subunit tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
kan
Kordia antarctica
Pathway
kan03030
DNA replication
kan03430
Mismatch repair
kan03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
kan00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
IMCC3317_13490 (dnaX_1)
03430 Mismatch repair
IMCC3317_13490 (dnaX_1)
03440 Homologous recombination
IMCC3317_13490 (dnaX_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
kan03032
]
IMCC3317_13490 (dnaX_1)
03400 DNA repair and recombination proteins [BR:
kan03400
]
IMCC3317_13490 (dnaX_1)
Enzymes [BR:
kan01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
IMCC3317_13490 (dnaX_1)
DNA replication proteins [BR:
kan03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
IMCC3317_13490 (dnaX_1)
DNA repair and recombination proteins [BR:
kan03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
IMCC3317_13490 (dnaX_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta2
AAA
DNAX_ATPase_lid
RuvB_N
AAA_22
AAA_14
Rad17
AAA_5
nSTAND3
AAA_30
DNA_pol3_delta_C
AAA_16
AAA_18
RCF1-5-like_lid
Mg_chelatase
AAA_7
AAA_assoc_2
RNA_helicase
AAA_24
NPHP3_N
DUF815
Sigma54_activ_2
VapE-like_dom
NACHT
SRP54
DNA_pol3_gamma3
AAA_33
NESP55
Motif
Other DBs
NCBI-ProteinID:
QHI35996
UniProt:
A0A7L4ZIG7
LinkDB
All DBs
Position
1623291..1625183
Genome browser
AA seq
630 aa
AA seq
DB search
MTTVSCLKLYFQLHHFCIGKPVNKKAELSRCWLCFIRIVLLYLLSEDYPNSMEHFIVSAL
KYRPQTFKDVVGQQAITNTLEKAIERSHLAQALLFCGPRGVGKTTCARILAKKINQDGTE
NPDEDFAFNIFELDAASNNSVDDIRSLIDQVRIPPQVGKYKVYIIDEVHMLSQAAFNAFL
KTLEEPPKHAIFILATTEKHKIIPTILSRCQIFDFKRIGVKDAKEYLKFIAESQGVEADD
DALHIIAQKADGAMRDALSIFDRVVSFSGKQLTRQAVTENLNVLDYDIYFAATDLILENN
IPQLLVDFNETLSKGFDGHHFIAGIASHFRDLLVCKNEATIPLLEVGDQTKNKYLEQSRK
TSQQFLMKGIELANGCDLKYKTSRNQRLLVELCLMQLASINYDGEKKNSDRFIIPATFFL
INGKKIDPIVKIKEIETEVEVETKTEVEATETTEKTSEQKVETPPLVKPKIDISMMRNKV
SGLSLSSIKAKQEHLKKQQGKVVHKKDLPSDAFTEERMREVWNEYVEKLDKKGEKIMWSL
LSTDIPKLKNETTICLEMPNETMRIEIERAQYPLLEYVRTALNNYDVSLEIDVNELTAKK
YVFTTRDKYEKLKEINPLVERLRKDFDLEI
NT seq
1893 nt
NT seq
+upstream
nt +downstream
nt
atgacaactgtttcctgtttaaaattatactttcaattgcatcatttctgtattggaaaa
cctgttaataaaaaagcagaactatctcgctgttggctatgtttcattagaattgtattg
ttatatttgctttcagaagattaccctaattctatggaacatttcatcgtatcagctctt
aaatacagaccacaaacctttaaggatgttgttggtcaacaagcgattacaaatacgtta
gaaaaagccatagaacgcagtcatctggcgcaagccttattattttgcgggccaagaggt
gtcggaaaaactacctgcgcgcgtattttggcaaaaaagatcaatcaagatggaactgaa
aatcctgatgaagattttgcttttaatatttttgaactcgatgccgcttcaaacaattcc
gtagatgatattcgaagtttaattgaccaagttcgtattccgccgcaagtaggtaaatac
aaagtatatattattgatgaggttcacatgttatcacaagcagcttttaatgcgttttta
aaaaccttagaagaaccgccaaaacatgccatttttattctggctacgaccgaaaaacac
aaaattattccgacgattttatccagatgtcaaatttttgattttaaacgaatcggcgta
aaagatgcaaaagaatatttaaaatttattgccgaaagtcaaggtgtagaagcggacgat
gatgcattgcacattattgctcaaaaagcagatggcgctatgcgtgatgcactttctatt
tttgacagagttgtcagtttttctggaaaacaattaacacgacaagccgttaccgaaaat
ttgaacgtgcttgattatgatatttattttgcggcaaccgatttaattctcgaaaataac
attccacaattattagttgatttcaacgaaactttatctaaaggatttgacggacatcat
ttcattgctggaattgcttctcattttagagatttattagtctgtaaaaatgaagccacc
attcctttgttggaagttggcgatcagaccaagaataaatatttagaacaatcgcgaaaa
acgtcgcaacaatttctcatgaaaggaattgaactggcaaacggttgtgatttaaaatac
aaaacaagcaggaatcaacggcttttagttgaattatgcttaatgcagcttgcctctatc
aattatgatggagaaaaaaaaaatagcgatcggttcataattcctgccacttttttcttg
ataaatggtaaaaagattgatccaattgtaaaaataaaagaaattgaaactgaagttgaa
gttgagactaaaaccgaagttgaagctacagaaactactgaaaagacttccgaacaaaaa
gtagaaactccgccacttgtaaaaccaaagattgatatttccatgatgcgaaataaagtt
tctggtttatcattatctagcattaaagcaaagcaagaacatttaaaaaaacagcaagga
aaagttgttcataagaaagatttgccaagcgatgcctttacggaagaacgcatgcgagaa
gtgtggaacgaatacgtggaaaaactcgataaaaaaggcgaaaaaatcatgtggtcttta
ttatctaccgatattccgaagttgaaaaacgaaacaactatttgtttagaaatgccaaat
gaaacgatgcgcattgagattgagcgcgcacaatatccattgttggaatatgtgagaact
gcgttgaataattatgatgtttcactagaaattgatgtaaacgaattgaccgcaaaaaag
tatgtgtttacaacgcgtgataagtatgaaaaactgaaagaaattaatccgttagtagaa
cgacttcgtaaagattttgatttagaaatttaa
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