Kordia antarctica: IMCC3317_16940
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Entry
IMCC3317_16940 CDS
T06371
Symbol
gyrB
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
kan
Kordia antarctica
Brite
KEGG Orthology (KO) [BR:
kan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
kan03032
]
IMCC3317_16940 (gyrB)
03400 DNA repair and recombination proteins [BR:
kan03400
]
IMCC3317_16940 (gyrB)
Enzymes [BR:
kan01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
IMCC3317_16940 (gyrB)
DNA replication proteins [BR:
kan03032
]
Prokaryotic type
DNA Topoisomerases
IMCC3317_16940 (gyrB)
DNA repair and recombination proteins [BR:
kan03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
IMCC3317_16940 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
HATPase_c_3
Toprim_4
Motif
Other DBs
NCBI-ProteinID:
QHI36332
UniProt:
A0A7L4ZI65
LinkDB
All DBs
Position
complement(2057811..2059748)
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AA seq
645 aa
AA seq
DB search
MSEEKKDQYSADSIQALEGMEHVRMRPSMYIGDVGTRGLHHLVYEVVDNSIDEALAGHCD
VISVVINEDNSITTEDNGRGIPIGIHKKEGVSALEVVMTKIGAGGKFDKDSYKVSGGLHG
VGVSVVNALSTHLKATVFREGKVWEQEYERGKPLYPTKAVGDSDKTGTVVMFRPDASIFT
QTLEYNYETIANRMRELSYLNKGITITLTDKRNKDEKGEFVHEVFHSTEGLKEFIRYLDG
NRVQIISDVIAFEGEKNGIPVEVAMTYNTSYSENLHSYVNNINTHEGGTHLSGFRRGLTH
TLKKYAEGTGLLDKLKFDIAGDDFREGLTAIISVKVQEPQFEGQTKTKLGNREVSASVSQ
AVSEMLTDYLEEHPDDAKTIVQKVVLAAQARHAAQKAREMVQRKTVMSIGGLPGKLSDCS
EQDPAKCEVFLVEGDSAGGTAKQGRDRMFQAILPLRGKILNVEKAMKHKVFENEEIKNIF
TALGVTIGTEEDSQALNLSKLRYHKVVIMCDADVDGSHISTLILTFFFRYMKELIENGHI
YIAAPPLYLVKKGAKRKYAWNDQERDVIVEEFGGGAGIQRYKGLGEMNAEQLWDTTMNPE
FRTLRKIVIDSGAEADRVFSMLMGDEVPPRREFIEKNAVYANIDA
NT seq
1938 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaagaaaagaaagatcaatattctgctgatagtatacaggcattagaaggaatg
gagcatgtacgtatgcgtccttccatgtatattggagatgttggtacacgcggattacat
catttagtatatgaagttgtcgataattctattgatgaagcactagcaggtcattgcgac
gttataagcgttgtaatcaatgaagataactccattacgactgaagataatgggcgtggt
attccaattgggattcacaaaaaagaaggtgtttcggcattagaagttgtaatgacgaaa
attggtgctggtggaaaatttgataaagattcctataaagtatctggtggattgcacgga
gttggtgtatcggttgtaaatgccctttctactcacttaaaagcaacagtttttagagaa
ggaaaagtttgggaacaagaatatgaacgcggaaaacctttatatccaacaaaagcagtt
ggagattctgataaaactggtacggtagtaatgtttagaccagatgcgtctatatttaca
caaactttagaatacaactacgaaaccatcgcaaatcgtatgcgcgaattgtcatacctt
aacaaaggaatcacaatcacacttacggataaacgtaacaaagacgaaaaaggagaattt
gtccatgaagtttttcattctaccgaaggattaaaagaatttataagatatttagacgga
aaccgtgtacaaatcattagcgatgtaattgcttttgaaggagagaaaaacggaattcca
gttgaggttgcaatgacgtataacacttcgtattctgaaaatttacattcatatgtaaac
aatatcaatacacacgaaggtggaacacacttatcaggatttagaagaggtttaacgcat
acgctgaaaaaatatgcagaaggaacaggattattagacaaattaaagtttgacattgct
ggagatgatttccgcgaaggactaaccgcaattatttctgtaaaagtccaagagccacaa
tttgaaggacaaaccaaaacaaaattaggaaaccgtgaagtatctgcatctgtaagtcag
gcagtatcagaaatgctaacggattacttagaagaacatccagacgacgctaaaactatt
gtgcaaaaagtagtgttagctgcgcaagcgcgtcatgccgcacaaaaagcgcgtgaaatg
gtacagcgtaaaacggtgatgagtattggaggtttgcctgggaaactgagtgactgctct
gagcaagatcctgcaaaatgtgaagtatttcttgtcgagggagattcggcaggtggaacg
gcaaaacaaggtcgtgaccgtatgtttcaagcaattttaccattacgtggaaaaatcttg
aacgtagagaaagcaatgaagcacaaagtttttgaaaacgaagaaatcaaaaatatcttt
acagcgcttggtgtaactatcggaaccgaagaagatagtcaagcattaaacctttcaaaa
ttaagatatcataaagtagtgattatgtgtgatgccgatgtcgatggatcgcatatttct
acattaatcctaacattctttttccgttacatgaaagaattgattgaaaacggacacatt
tacattgctgcgccaccattatatttggttaaaaaaggagcaaaacgtaaatatgcttgg
aacgatcaagaacgtgatgttattgttgaagagtttggcggaggagcaggaattcaacgc
tacaaaggtcttggggaaatgaacgcagaacaattgtgggacacaaccatgaatccagaa
ttcagaacattacgtaaaatagtaattgatagtggagcagaagcagacagagtattctcc
atgttaatgggagacgaagtgccgccacgtagagagtttattgaaaaaaatgcagtctat
gcaaatattgatgcgtaa
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