Kordia antarctica: IMCC3317_23230
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Entry
IMCC3317_23230 CDS
T06371
Symbol
topA
Name
(GenBank) DNA topoisomerase 1
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
kan
Kordia antarctica
Brite
KEGG Orthology (KO) [BR:
kan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
kan03032
]
IMCC3317_23230 (topA)
03400 DNA repair and recombination proteins [BR:
kan03400
]
IMCC3317_23230 (topA)
Enzymes [BR:
kan01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
IMCC3317_23230 (topA)
DNA replication proteins [BR:
kan03032
]
Prokaryotic type
DNA Topoisomerases
IMCC3317_23230 (topA)
DNA repair and recombination proteins [BR:
kan03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
IMCC3317_23230 (topA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Toprim_C_rpt
Toprim
PL28
Motif
Other DBs
NCBI-ProteinID:
QHI36952
UniProt:
A0A7L4ZJZ1
LinkDB
All DBs
Position
complement(2741874..2744381)
Genome browser
AA seq
835 aa
AA seq
DB search
MAKNLVIVESPAKAKTIEKFLGKDFKVESSFGHIADLPSKELGVNVDGDFEPEYVVSDDK
KAVVKKLKDLAKKAEMVWLASDEDREGEAIAWHLSETLKLTPERTKRIVFHEITKTAILK
AIENPRDIDYNLVNAQQARRILDRLVGYELSPVLWRKVKGGLSAGRVQSVSVRLIVERER
SIQEFNPQATFKVAAEFLNSEGKKFKARLNKTFPTHKAAKDFLAKNVGANFKIANLETKP
AKKSPAAPFTTSTLQQEASRKLYFSVSKTMTLAQRLYEAGYITYMRTDSVNLSNDAKSAA
EAEITRAYGKEYSKPRNYKSKSKGAQEAHEAIRPTIMENHSVQAEYDQVRLYELIWKRTV
ASQMSDAQLERTNAKIEADTHGERFTANGEVLKFEGFLKVYLEGKDDDEEEQDGMLPTLK
VGEQLANEYISATQRYTQAPYRFTEASLVKQLEELGIGRPSTYAPTISTIQNRGYVDKGT
VDGVERKYEQLTLEGDKIIEKELTEKVGSDKGKLVPTDIGMIVNDFLVKNFASILDYNFT
AKVEQDFDNIAEGKEEWKVMMKNFYNDFHPKVEDVKENAERESGERILGKDPESGKQVSV
RLGKFGPMVQVGTVDDEDKPKFASLSPDQQLNTITFEEAMDLFQLPKALGEYKGETVEVN
NGRFGPYVKLGKKFISLDKGEDPLSVEMDRALELIKARELADAPIAQYDTHDVTKGVGRF
GPFLKWNGIFINVNKKYDFDNLSQEDIEQLIEEKKQKEIDKVIHNWEEEGIRVEKARWGR
SNVLKGKIKIELPKTVDASKLTLEEVQKMIEEKTPKKKAKAKPKAKAKAKPKAKK
NT seq
2508 nt
NT seq
+upstream
nt +downstream
nt
atggcaaagaatctggtaattgttgagtcacctgcaaaagcaaaaacgattgagaaattt
cttgggaaagatttcaaagtagaatcgagttttggacatattgctgacttaccttccaaa
gaattaggtgtaaatgttgatggcgattttgagccagaatatgtagtctctgatgataaa
aaagcagttgtaaaaaaactgaaagacttagcgaagaaagcagaaatggtttggctcgct
agtgatgaagatcgagaaggagaagcaattgcatggcatttatcggaaacattaaagctt
acgccagaacgtacaaagcgaattgtatttcacgaaattaccaaaactgccattctaaaa
gcaatcgaaaatccaagagatattgattataacttagtaaatgcacaacaagcccgaaga
atcttagacagattagtaggttatgaattgtcgccagtactctggagaaaagtaaaaggc
ggattatctgcaggaagagtacaatcggtttcggttcgtttaattgtagagcgcgaacgt
agtattcaagaattcaatccgcaagcaactttcaaagtagctgccgaattcctaaactca
gaaggaaaaaaattcaaagccagactcaataaaacatttccaacacacaaagcagcaaaa
gatttcttagctaaaaatgttggcgccaacttcaaaattgccaatttagaaacaaaacca
gcaaaaaaatcgccagcagcgccatttaccacatcaaccttacaacaagaagcatcgcga
aagctatatttctctgtaagtaaaacaatgaccttggcacagcgtttatatgaagctggg
tatataacatacatgagaacggatagtgtaaacttgtctaacgatgcaaaaagcgcagcg
gaagcagaaatcactcgtgcttatggaaaagaatacagcaagccaagaaactataaaagt
aaatcaaaaggcgcacaagaagcgcacgaggcaatcagacctaccattatggaaaaccat
tcggtacaagctgaatacgatcaagttcgtttatatgaactcatctggaaacgtactgta
gcttctcaaatgagcgatgcgcaattagaacgtaccaacgcaaaaattgaagcagataca
catggcgaacgttttactgcaaacggtgaagtattaaaatttgaaggtttcctaaaagta
tatcttgaaggaaaagatgatgacgaagaagagcaagacggaatgttgccaacgttaaaa
gttggtgagcaacttgccaatgaatacatttcggcgacacaacgttacacacaagcgcca
tacagatttacggaagcatctttagtaaagcaactagaagaactaggaattggaagaccg
tcaacatacgcgccaaccatttctacgattcaaaacagagggtatgttgacaaaggaact
gttgatggagtagaaagaaaatacgagcaactaacattagaaggtgataaaatcattgaa
aaagaactcacggagaaagtaggttcagacaaaggaaagttagtgccaacggatattgga
atgattgtaaatgatttcttggtgaaaaatttcgcttcgatattagattacaactttact
gcaaaagtagagcaagactttgataatattgcggaaggaaaagaagaatggaaagtgatg
atgaaaaacttctataatgactttcatccaaaagtagaagacgtaaaagaaaatgcagaa
cgtgaatcaggtgaacgaattttaggaaaagatcctgaaagcggaaaacaagtaagtgtg
cgtttgggtaaatttggaccgatggttcaagttggaaccgttgacgatgaagacaagcct
aaatttgcaagtctgagtccagatcaacaactaaacaccatcacttttgaagaggcaatg
gatttatttcagttgccaaaagcacttggagaatacaaaggcgaaactgttgaggtaaac
aatggacgttttggtccgtatgtgaaattgggtaaaaaatttatttctcttgataaagga
gaagatcctttaagtgtggaaatggacagagctttagagttaattaaagcacgtgaacta
gcagatgcgccaattgctcaatatgatactcatgacgtaaccaaaggagttgggcgtttt
ggtcctttcctaaaatggaatggaattttcattaatgtgaataaaaaatatgactttgat
aatctttcgcaagaagatattgagcaattaatagaagagaagaagcaaaaagaaatagac
aaagtcattcataattgggaagaagaaggaatccgcgttgaaaaagcacgttggggaaga
agcaatgttcttaaaggaaaaataaaaatagaacttccaaaaacggttgatgcttcaaaa
ctgacgttggaagaagttcagaagatgattgaagagaaaactcctaagaaaaaagcaaaa
gcgaaaccaaaggcaaaagcgaaagcgaaaccaaaagcgaaaaaataa
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