Kordia antarctica: IMCC3317_26910
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Entry
IMCC3317_26910 CDS
T06371
Symbol
ribD_2
Name
(GenBank) Riboflavin biosynthesis protein RibD
KO
K01493
dCMP deaminase [EC:
3.5.4.12
]
Organism
kan
Kordia antarctica
Pathway
kan00240
Pyrimidine metabolism
kan01100
Metabolic pathways
kan01232
Nucleotide metabolism
Brite
KEGG Orthology (KO) [BR:
kan00001
]
09100 Metabolism
09104 Nucleotide metabolism
00240 Pyrimidine metabolism
IMCC3317_26910 (ribD_2)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
kan02044
]
IMCC3317_26910 (ribD_2)
Enzymes [BR:
kan01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.4 In cyclic amidines
3.5.4.12 dCMP deaminase
IMCC3317_26910 (ribD_2)
Secretion system [BR:
kan02044
]
Type II secretion system
Competence-related DNA transformation transporter (DNA-T) core components
IMCC3317_26910 (ribD_2)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
dCMP_cyt_deam_1
MafB19-deam
SNAD4
Bd3614-deam
APOBEC_N
APOBEC4_like
NAD1
APOBEC2
APOBEC3
APOBEC1
Inv-AAD
APOBEC4
NAD2
Motif
Other DBs
NCBI-ProteinID:
QHI37312
UniProt:
A0A7L4ZL27
LinkDB
All DBs
Position
complement(3159416..3159850)
Genome browser
AA seq
144 aa
AA seq
DB search
MPKQKQAKYDHAYLRMAKEWGKLSYCKRKQVGAIVVKDRMIISDGYNGTPSGFENFCEDE
EGYTKWYVLHAEANAILKVAASTQSCVGATLYITMSPCKECSKLIHQSGITRVVYVTAYK
DDSGVQFLQKAGVEVEHIPTLQTS
NT seq
435 nt
NT seq
+upstream
nt +downstream
nt
atgccgaaacaaaaacaagcaaaatatgatcacgcctatttacgaatggcaaaagaatgg
ggaaaactctcttattgtaagcgtaaacaagtcggcgcgattgttgtaaaagatagaatg
attatttctgacggttacaacggaacaccttcaggatttgaaaatttctgtgaagatgaa
gaaggttataccaaatggtacgtgcttcatgcagaagcaaacgctattttaaaagtagcg
gcttctacacaatcatgtgttggtgcaacgttgtacattacgatgtcgccatgtaaagaa
tgtagcaagctcattcatcaatcaggaattacgcgagttgtatatgtaaccgcgtacaaa
gatgactcaggtgtacaatttttacaaaaagcaggcgttgaagtagaacacattccaaca
ttgcaaacctcataa
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integrated database retrieval system
