Kordia antarctica: IMCC3317_30360
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Entry
IMCC3317_30360 CDS
T06371
Symbol
pbpF
Name
(GenBank) Penicillin-binding protein 1F
KO
K05367
penicillin-binding protein 1C [EC:
2.4.99.28
]
Organism
kan
Kordia antarctica
Pathway
kan00550
Peptidoglycan biosynthesis
kan01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
kan00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
IMCC3317_30360 (pbpF)
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
kan01003
]
IMCC3317_30360 (pbpF)
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
kan01011
]
IMCC3317_30360 (pbpF)
Enzymes [BR:
kan01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
IMCC3317_30360 (pbpF)
Glycosyltransferases [BR:
kan01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
IMCC3317_30360 (pbpF)
Peptidoglycan biosynthesis and degradation proteins [BR:
kan01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
IMCC3317_30360 (pbpF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
BiPBP_C
Transpeptidase
Motif
Other DBs
NCBI-ProteinID:
QHI37655
UniProt:
A0A7L4ZM43
LinkDB
All DBs
Position
complement(3546141..3548495)
Genome browser
AA seq
784 aa
AA seq
DB search
MLEKNFKRIKNNKIKTAIFVILLIAYYFCLPKTLFNTPTSTVIESREGILLGAKIADDGQ
WRFPKLDSVPEKFKICIVQFEDEYFYNHPGFNPISIAKALWQNIESGEVKRGGSTLTQQV
IRLSRKGQKRSYVEKFKELILATRLEFRYTKDEILTFYASHAPFGGNVVGLDAAAWRYFG
RRPQELSWAENATLAVLPNAPSLIYPGKNQLRLKAKRDRLLKKLKEQEIIDQLTYELATK
ETLPQKPYALPQTATHLLNKVAETHKGKRVQTSVESYLQQEANAIVAKHYKELKQNQIYN
ASVLILDVKTRKVLAYVGNTPTDRAHQKDVNVIHKPRSTGSIMKPFLYTAILDAGDLLPN
TLVVDVPTKIGTYNPKNYTDTYDGAVTAKRALARSLNVPAVRMLQQFGLDRFHYYLKELN
LKDISYSADHYGLSLILGGAESNLWDLCKTYAAFSSTLTHFGENSSQYFTNEFCEPSFLL
DENVDFGTLTREKTIFDAGSMYLTYESLKEVNRPEGEENWEFFDSSKQIAWKTGTSFGFR
DAWAIGTTKDYVVGVWVGNADGEGRPGLIGSSAAAPILFDIFEVLPNSDWFDVPYDALEE
VSICSKSGYRASELCEEAQLQFIPRSGLKTKPCPYHIWVHLDKDERYQVNSSCQPLSEMT
HKSWFVLPPLMEYYYQNKNPLYKTLPPFRKDCTAEGQKSMDFLYPEEAVKVFLPKDFDGS
KNGLILRLAHSIPETKVFWYLDEAYLGTTETIHEMEVKPTAGIHKITVVDEFGNEARRTI
EIQE
NT seq
2355 nt
NT seq
+upstream
nt +downstream
nt
ttgttagaaaaaaatttcaaaagaataaagaacaataaaattaaaacagcaatctttgta
atactactgattgcctactatttttgtttgccaaaaacactttttaatacgccaacttct
acggttattgaaagtcgtgaaggtattttgcttggcgcgaaaattgccgatgacggacaa
tggcggtttccaaaactagattcggttccagagaaattcaaaatttgtattgttcagttt
gaagatgaatatttctataatcatcctggattcaacccgatttcaatcgcgaaagcgtta
tggcaaaatatagaatcgggcgaagtaaaacgtggcggaagtacgttgacacaacaagta
attcgattgtctcggaaaggacagaaacgttcgtatgttgagaaattcaaagaattaata
ctcgcaacacgattagaatttagatatactaaagacgaaattttaactttttacgcttca
cacgcgcctttcggcggaaatgttgtcggattggacgcagcagcttggcgctattttgga
agaagaccgcaagaactttcgtgggcagaaaatgctacgttagccgtattgccaaatgct
ccaagtttgatttatcctggaaagaatcaactgcgactgaaagcaaaaagagatcgatta
ctcaaaaaattaaaagagcaagaaattattgatcaattaacctacgaattggcaactaaa
gaaacacttccacaaaaaccatatgcattgccacaaacggcaacacatttgctaaataaa
gttgcagaaacgcacaaaggaaaacgtgtacagacttccgtagaatcgtatcttcagcaa
gaagcaaacgcaattgtagcgaagcattacaaagaattaaagcagaatcaaatttacaat
gcttctgtattaatcttagacgtaaaaacacgaaaagtactcgcatatgttggaaatacg
ccaacggatagagcgcatcaaaaagatgtaaatgtcattcacaaaccaagaagtacagga
agtattatgaagccatttttgtacacggcaattttggatgctggcgatttgttaccaaat
acattagtcgttgatgtgccaacaaaaattggaacgtacaatcctaaaaattacacagat
acatatgatggcgcagtaacggcaaaaagagcattggcgcgttcgttgaatgttcctgcg
gtgcgaatgttgcaacaatttggcttggatagatttcattattatctcaaagaattgaac
ttaaaagatatatcgtatagtgccgatcattatggactttcattgattttaggcggcgca
gaaagtaatttgtgggatttatgcaaaacatatgctgcattctcttctacgctgacacat
tttggcgaaaactcaagtcaatattttacgaatgaattttgtgaaccttcttttttgttg
gatgaaaacgttgattttggaacgcttacgcgcgaaaaaacaatctttgacgcaggttct
atgtatttaacctacgaatctttgaaagaagtaaacagaccagaaggcgaagaaaattgg
gagtttttcgattctagcaaacaaattgcatggaaaacaggcacaagttttggttttcgg
gatgcttgggcaattggcacaacgaaagattatgtagttggcgtttgggttggaaatgcc
gatggcgaaggcagaccaggattgattggctcttctgcggcagcgccaattttgttcgat
atttttgaagtattaccaaatagcgattggtttgacgttccgtatgacgcacttgaagaa
gtttctatctgttcaaaaagtggttaccgagcttccgaattgtgtgaagaagcgcaattg
cagtttattccacgaagcggattgaaaacaaaaccatgtccgtatcatatttgggtacat
ttggacaaagacgaacgttaccaagtgaattcttcgtgtcagccattgagtgaaatgacg
cataaaagttggtttgtgttgccgccattgatggaatattattatcagaataaaaatccg
ttgtataaaacattgccgccttttcggaaagattgtaccgcagaaggacaaaaaagtatg
gactttttgtatcctgaagaagctgtaaaagtgtttttaccgaaagattttgacggaagt
aaaaatggtctgattttacgtttggcgcattctattccagaaaccaaagtgttctggtat
ttggatgaagcttatttaggaactaccgaaactattcacgaaatggaagtgaagccaaca
gcaggaattcacaaaatcactgttgttgacgaatttggtaatgaagcgagaagaactatt
gagattcaggagtaa
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