Kordia antarctica: IMCC3317_36360
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Entry
IMCC3317_36360 CDS
T06371
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
kan
Kordia antarctica
Pathway
kan03030
DNA replication
kan03430
Mismatch repair
kan03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
kan00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
IMCC3317_36360 (dnaE)
03430 Mismatch repair
IMCC3317_36360 (dnaE)
03440 Homologous recombination
IMCC3317_36360 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
kan03032
]
IMCC3317_36360 (dnaE)
03400 DNA repair and recombination proteins [BR:
kan03400
]
IMCC3317_36360 (dnaE)
Enzymes [BR:
kan01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
IMCC3317_36360 (dnaE)
DNA replication proteins [BR:
kan03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
IMCC3317_36360 (dnaE)
DNA repair and recombination proteins [BR:
kan03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
IMCC3317_36360 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
RNase_T
tRNA_anti-codon
Intimin_C
Motif
Other DBs
NCBI-ProteinID:
QHI38247
UniProt:
A0A7L4ZP38
LinkDB
All DBs
Position
4236805..4241187
Genome browser
AA seq
1460 aa
AA seq
DB search
MYLIFDTETTGLPKRWDAPISDTDNWPRCIQIAWQLHDELGNLVEHQDYLVQPDGFNIPY
DAEKIHGISTELAAEQGISLQEMLAKFNVALSKAKFIVGQNLKFDLNIMGAEFHRENVAN
KLQELPVLDTCTEATASLCQLPGGRFGKFKLPTLTELHNYLFGVGFGEAHNATADVEATT
RCFLELIRRKEYSIEKLDVTPDYFERFSENNPQPIKLIGLKHINLKKASEKIRQRLAKIQ
PDDGISKEELAENIQTLQDAPFSHLHNHSQFSVLQSTSSITDLVKAASKYNMEAVSITDH
ANMMGAFHFVSAVSNHNRGVKERIAEAEAKGETSDENILKPILGCEFFVCEDHLDKTRKD
NGYQIVFLAKNKKGYHNLAKMSSIAYTQGFYYVPRIDKKVIEQYKEDLIILTGNLYGEVP
SKVLNIGEVQAEEALLWWKETFQDDLYVEIMRHDQEDENRVNDVLLRLAKKHEIQLVATN
NTYYIAQEDANAHDILLCVKDGEKQATPIGRGRGYRYGMPNQEYYFKSPNEMKTLFKDLP
EAILSIQEITDKVEPYELARDVLLPAFDIPEEFLFEEDKADKGKRGENKYLRHLTYVGAK
KRYGEITTAIEERLDFELATIEKTGYPGYFLIVEDFIREARNMDVSVGPGRGSAAGSVVA
YCLWITNIDPLLYDLLFERFLNPDRVSMPDIDIDFDDEGRSRVMDYVIDKYGKNQVAQII
TYGTMAAKSSIRDTARVLDLPLSDADRIAKLIPNAKLAKIFGKSDAELKSKFRTEEILLI
NELVNLSEEDGLEAETINMARVLEGSVRNTGIHACGVIITPDDITKFVPVALAKDSEMYC
TQFDNSVVEDAGLLKMDFLGLKTLTLIKDTVKLVKYKHDIDIDIDEISLDDEKTYELFQK
GETVGVFQYESPGMQKHMKSLKPTTFADLIAMNALYRPGPMEYIPSFIRRKHGEEDIEYD
LDACEEYLKETYGITVYQEQVMLLSQKLADFTKGEADVLRKAMGKKQKSVLDKMKPKFIK
QASEKGHAADKLEKIWKDWEAFAAYAFNKSHSTCYAWIAYQTAYLKAHYPAEYMAAVLSN
NMNDIKTVTFFMEECKRMKLDVLGPDVNESFYKFAVNDSGAVRFGMGAIKGVGHGAVKTI
VKERAEGKYKSVFDLAKRIDLRAANKKAFENLALAGGFDSFGDTHRAQYLHTENDNITFL
EKAVKYGAKFQENANSAQVSLFGEASDVQIAEPLVPPCEEWGTMEKLAREKEVVGIYISG
HPLDDFKAEMDYFCNGTLGQFSQMENYLNREIAFGGVVTDVQHRVSKNGKGWALFTVEDY
TESYEFRIFGEEYLKFRHFFVPNSFVYIKAFIKEGWTNRDTGKKGDPRIQFNSMQQLQDV
METTARKLTIQLDVNRLKEKKLNFINEILSTHKGDKSLHFTLYERKEKIKLQAPSKNQKV
NITQELLDALTEENVRYKIN
NT seq
4383 nt
NT seq
+upstream
nt +downstream
nt
atgtacttaatatttgataccgaaactaccggattaccaaaacgatgggacgcacctatt
tcagacacggataactggcctagatgtattcaaattgcttggcaattgcacgatgaattg
ggaaatctcgttgagcatcaagattatttagtgcaaccagacggttttaacattccgtat
gatgcagaaaaaattcacggaatatctacggaattagcagccgaacaaggaatttcgttg
caagaaatgttagcgaagtttaatgttgcattatcaaaagcaaaattcatcgttggacaa
aatcttaagttcgatctcaacattatgggcgcagaatttcaccgagaaaatgttgctaac
aaattgcaagagcttcccgtattagatacctgtacggaagcgacagccagcttatgtcaa
ttaccaggaggaagatttgggaaatttaaacttccaacactaacagaattacacaactat
cttttcggagtcggatttggagaagcgcacaacgcaactgccgatgtagaagcaacaaca
cgttgttttttagaattaattcgaagaaaagaatacagcattgaaaaactagatgttacg
ccagattactttgagcgtttctcagaaaacaatccgcagccgattaaattaattggttta
aaacacatcaatctcaaaaaagcatctgaaaaaattcggcagcgtttggcaaaaattcag
ccagacgacggaatttctaaagaagaacttgcggagaacattcaaaccttgcaagatgcg
ccattttcgcacttgcacaatcattcgcaattctcagtattacaatcaacttcaagcatt
accgacttagtaaaagcggcttccaaatacaatatggaagcggtttccattacagatcat
gcaaatatgatgggcgcgtttcactttgtgtcagcagttagcaatcataatagaggagtc
aaggaacgaatcgcggaagcggaagcaaaaggagaaacaagtgacgagaacattctaaag
ccaatactaggttgtgaattttttgtctgcgaagatcatttagacaaaacaagaaaagac
aacggatatcaaattgtattcttagccaaaaacaaaaaaggctatcacaatttggcaaaa
atgtcctcaattgcatatacacaaggattttattacgttccgagaatcgacaaaaaagta
atagaacaatacaaagaagatttaattattttgacaggaaatctctacggggaagttcca
agcaaagttttaaacatcggagaagtgcaagcggaagaagcattgctctggtggaaagaa
acctttcaagatgatttgtatgtggaaatcatgcggcacgatcaagaagatgaaaatcgt
gtaaatgatgtgttgttgagacttgccaaaaagcacgaaattcaattagttgcgacgaat
aatacgtattacatcgcacaagaagatgcaaatgcacatgatattttattatgtgtaaaa
gatggcgaaaaacaagcaacaccaattggacgcggacgcggatatcggtatggaatgcca
aaccaggaatactatttcaagtcgccaaacgaaatgaaaaccttgtttaaagatttgcca
gaagcaattctttccattcaagaaattacagataaagtagaaccatacgaacttgctcgt
gatgtattattacctgcgtttgatattccagaagaatttctgtttgaagaagataaagct
gacaaaggaaaacgtggagaaaacaaatatttacgacacttaacatatgtaggtgccaaa
aaaagatacggcgaaattacgacagcaattgaagaacgactcgattttgaacttgctacg
attgaaaaaacaggatatccagggtatttcttaattgttgaagattttatccgcgaagcc
cgaaatatggacgtttcggtaggtccaggtcgtggatctgcggcaggttcagtagttgcc
tattgtttatggattacgaatattgatccattgctgtacgatttgctttttgagcgtttc
ctaaatcctgatcgtgtgtcgatgcccgatattgatattgactttgatgatgaaggaaga
agtcgcgtaatggattacgtaattgataaatacggtaaaaaccaagttgcgcaaattatt
acctacggaacaatggcggcaaaatcgtccattcgtgatactgcgcgtgtgttagatttg
cctttaagtgatgcagacagaatagccaaattgattccaaatgcaaaacttgctaagatt
ttcggaaaatcggatgcggaactcaaatcaaaattccgaacagaagaaatactgctaatt
aacgaattggtgaatctttcggaagaagatggcttagaagcggaaaccataaacatggca
cgtgtcttagaaggttcggttcgaaatacaggaattcatgcgtgtggagttatcattacg
ccagacgatattacaaaattcgttccggttgctttggcgaaagattccgaaatgtactgt
acacaatttgataactcagttgtggaagatgctggtctgttaaaaatggacttcttagga
ttgaaaaccttaaccttaataaaagataccgtaaagcttgtcaaatacaagcatgatatt
gacattgatattgatgaaatttccttggatgatgaaaaaacttatgagttgttccaaaaa
ggagaaaccgtaggtgtatttcaatatgaatcgcccggaatgcaaaaacatatgaaatcg
ctcaaaccaacaacgtttgccgatctcattgcaatgaacgcattgtatcgtcctggacca
atggaatacattccgagtttcattcgtagaaaacatggagaagaagatattgaatacgat
ttagatgcgtgtgaagaatatttaaaagaaacttacggaattacagtctatcaagagcaa
gtgatgttgctgtcgcagaaattagcagattttaccaaaggtgaagccgatgttttgcgt
aaagcaatgggaaaaaagcagaaatcggtgttggataagatgaagccgaaatttataaaa
caagcttcagaaaaaggacatgcagctgataaattagagaaaatctggaaagattgggaa
gcatttgcagcgtacgcctttaacaaatcgcactctacatgttatgcttggattgcgtat
caaacggcatacttaaaagcgcattatcctgcggaatatatggcggctgtactttctaat
aatatgaatgatattaaaacggttaccttctttatggaagaatgtaaacgtatgaaattg
gacgttttaggaccagatgtaaatgaatcgttttacaaatttgcggtaaatgattcaggt
gctgttcgtttcggaatgggcgcaataaaaggcgttggacatggcgcagtaaaaacaatt
gtaaaagaacgcgcagaaggaaaatataaatctgtatttgatctcgcgaagcgaatagat
ttacgcgcagccaataaaaaagcatttgaaaatttagcgctcgctggcggatttgactcg
tttggagatacgcacagagcccaatatttacacacagaaaacgataatattacattttta
gaaaaagcggtaaaatatggcgcaaaatttcaagaaaacgcaaactctgcacaagtaagt
ttgtttggagaagcaagtgatgtgcaaatagccgaaccgttagttccgccatgtgaagaa
tggggaaccatggagaaattggcgcgtgaaaaagaagtcgtaggaatctatatttctgga
catccgctagatgattttaaagcggaaatggattatttctgtaatggaacgcttggtcaa
ttttcacaaatggagaattacttgaatcgtgaaattgcgtttggtggcgttgttacagat
gtgcaacacagagtttctaaaaacggaaaaggttgggcattatttactgtggaagattat
acagaatcgtacgaatttagaatttttggagaagaatatttaaagtttagacatttcttt
gtgccaaactcgtttgtgtatatcaaagcgtttattaaggaaggttggactaatagagac
acaggaaaaaaaggtgatccgagaattcaattcaactccatgcaacaactccaagacgtc
atggaaactacggcgcgaaagttgactattcaattagatgtcaatagattaaaggagaaa
aaactcaattttataaacgaaattttatcaacgcacaaaggtgataaatcattgcatttt
acgttgtacgaacgaaaagaaaagataaaattacaagcaccaagcaaaaatcaaaaagta
aatattacacaagaattattggatgcattgactgaggaaaatgtacgatataagattaat
tag
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integrated database retrieval system
