Kordia antarctica: IMCC3317_38550
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Entry
IMCC3317_38550 CDS
T06371
Name
(GenBank) hypothetical protein
KO
K02342
DNA polymerase III subunit epsilon [EC:
2.7.7.7
]
Organism
kan
Kordia antarctica
Pathway
kan03030
DNA replication
kan03430
Mismatch repair
kan03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
kan00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
IMCC3317_38550
03430 Mismatch repair
IMCC3317_38550
03440 Homologous recombination
IMCC3317_38550
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
kan03032
]
IMCC3317_38550
03400 DNA repair and recombination proteins [BR:
kan03400
]
IMCC3317_38550
Enzymes [BR:
kan01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
IMCC3317_38550
DNA replication proteins [BR:
kan03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
IMCC3317_38550
DNA repair and recombination proteins [BR:
kan03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
IMCC3317_38550
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_T
GIY-YIG
DEDDh_C
GIY_YIG_2
Rv2179c-like
Motif
Other DBs
NCBI-ProteinID:
QHI38462
UniProt:
A0A7L4ZP77
LinkDB
All DBs
Position
complement(4472050..4473417)
Genome browser
AA seq
455 aa
AA seq
DB search
MYTIIDVETTGRSNQITEISIFKFDGTKVVDEFTSLVNPNALIPPYITTLTGIDNALVAN
APTFAEIAEEVLSITKDTIFVAHNVNFDYNVIRNEFKAIEIDFRSKKLCTVRLSRALLPG
HKSYSLGKLCKSLEIPLSDRHRARGDAAATVLLFELLLEQEAAEATFQKFLKPSSKEATL
PPHLPSKIFEALPIQAGVYYFKNKKGKIIYVGKAKNIQKRVLSHFYNKSKKELDLCRETA
DIDFELSGSELVALLMEDSAIKHHYPIYNSASKRKTKSYAIFEYSDRGGVKHLAFNDAKI
IQNPLITFYNIRDCRTYLERLCMQFELCPKYCHLQENVRECSHFLIQSCKGVCKKEEAVE
VYNERVDLAISHSLEASQNVVIKQKGRNANEEAFVLVKNGLYLGYGFVDLDVQINHTDEL
EHHLIKQKDNVDVQRILRKVLLETKVGKDLVFGVG
NT seq
1368 nt
NT seq
+upstream
nt +downstream
nt
atgtataccataattgatgttgaaactacaggacgtagcaatcaaatcacggagatttct
atttttaagtttgatggaactaaagttgtggacgagtttacttctttggtgaatccgaac
gcgctcattcctccgtatattacaacgttgacaggaattgacaatgcgctcgttgccaat
gcgccaacgtttgcagaaatcgcagaagaagtgttaagcattacgaaagacacgattttt
gtagcgcataatgtcaattttgattacaacgtaattcgcaatgaatttaaagcaatcgaa
attgattttagaagcaaaaaactgtgtacagttcggttatcgcgcgcgttacttcctgga
cataaatcttatagtttagggaaattatgcaagtcgttggaaattccactttcggacaga
caccgagctagaggcgacgcagcagcaaccgtacttttgtttgaattattgttagaacaa
gaagccgcagaagcaacttttcagaagtttttaaaaccgagttctaaggaagcgacactt
ccaccacatttaccaagtaaaatttttgaagccttgccaatacaagcaggcgtgtattat
tttaagaataaaaaaggtaagattatttatgttggaaaagcaaaaaatatacaaaaacgt
gtgttgagtcatttttataataaatctaaaaaagaacttgatttgtgtagagaaaccgca
gatattgattttgaattatcaggaagtgaattggttgctttattgatggaagattcagca
ataaaacatcattatccaatatataatagtgcttctaaacgaaagacaaaaagttatgcg
atttttgagtattccgatcgtggcggcgtgaaacatttggcgtttaatgatgccaaaatc
attcagaatccgttgattactttttacaatattcgcgattgtagaacgtatttggaacgt
ttatgtatgcaatttgaattgtgtccgaagtattgtcatttgcaagaaaatgttcgggaa
tgttcgcactttttgattcaatcctgtaaaggagtttgcaaaaaagaagaagctgtcgaa
gtctacaatgaacgtgttgatttggcaatttcgcattcgctagaagcttctcaaaatgtg
gtcattaaacaaaaaggacgaaacgccaacgaagaagcgtttgtgttagtcaaaaacggt
ttgtatttaggctacggatttgtggatttggatgtacaaataaatcacaccgacgaattg
gaacatcatctcatcaaacaaaaagacaatgtagatgtgcaacgtattttgcggaaggtg
ttgttggagactaaggttgggaaggatttggtttttggggttggttga
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