Kordia antarctica: IMCC3317_38720
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Entry
IMCC3317_38720 CDS
T06371
Symbol
ypdA_8
Name
(GenBank) Sensor histidine kinase YpdA
KO
K08082
two-component system, LytTR family, sensor histidine kinase AlgZ [EC:
2.7.13.3
]
Organism
kan
Kordia antarctica
Pathway
kan02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
kan00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
IMCC3317_38720 (ypdA_8)
09180 Brite Hierarchies
09181 Protein families: metabolism
01001 Protein kinases [BR:
kan01001
]
IMCC3317_38720 (ypdA_8)
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
kan02022
]
IMCC3317_38720 (ypdA_8)
Enzymes [BR:
kan01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.13 Protein-histidine kinases
2.7.13.3 histidine kinase
IMCC3317_38720 (ypdA_8)
Protein kinases [BR:
kan01001
]
Histidine kinases
LytTR family [OT]
IMCC3317_38720 (ypdA_8)
Two-component system [BR:
kan02022
]
LytTR family
AlgZ-AlgR (alginate production)
IMCC3317_38720 (ypdA_8)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
His_kinase
HATPase_c
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
QHI38479
UniProt:
A0A7L4ZPS4
LinkDB
All DBs
Position
complement(4489763..4490419)
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AA seq
218 aa
AA seq
DB search
MSSNELSLRYDLLNSQMNPHFINNAIQSICNSITKGNVNQSINWLNRLSRLYGLVQKSTK
CKMIDLLDEIEISRLYIELQKDLFDKGFKYTIKIDEALKDDLQYTKVPPLIFQPLIENAI
LHGLKGKKRTGKGELTISITLEKEMLYVCITDNGDGITKTKSELNESSGISLENINERLK
IINGNQCEKKLLHVRTLRNDTGMALGTRSCLRVPLIQI
NT seq
657 nt
NT seq
+upstream
nt +downstream
nt
atgtcatcaaatgaattatcgttaagatatgatcttttaaattctcaaatgaatccgcat
tttataaataatgcgattcaaagtatttgtaactctattaccaagggaaatgtgaatcag
tctataaactggctcaatagactttcacgtttgtacggattagttcaaaaatctaccaaa
tgtaaaatgattgatttgctagatgaaattgaaatttcacgattatatatcgaattgcaa
aaagacctttttgataaaggtttcaaatatactatcaagattgatgaagcactaaaagac
gatttgcagtacacgaaagtgcctccattaatttttcaaccattaattgaaaatgcaatt
ttacatggtttgaaaggtaaaaaacgaacaggaaaaggcgaattaacgatttcaattacg
ttagaaaaggagatgctttatgtttgtataactgacaatggcgacggaattacaaaaaca
aaaagtgaattgaatgaatcttctggaatctcactagaaaatataaatgaacgcttaaaa
attatcaatggcaatcaatgcgaaaagaagcttctgcacgtgcgaacgctacgaaatgac
acaggaatggctttaggtacacgaagttgtcttagagttccgcttattcaaatttaa
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