Kordia antarctica: IMCC3317_41130
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Entry
IMCC3317_41130 CDS
T06371
Symbol
rlmF
Name
(GenBank) Ribosomal RNA large subunit methyltransferase F
KO
K06970
23S rRNA (adenine1618-N6)-methyltransferase [EC:
2.1.1.181
]
Organism
kan
Kordia antarctica
Brite
KEGG Orthology (KO) [BR:
kan00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
kan03009
]
IMCC3317_41130 (rlmF)
Enzymes [BR:
kan01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.181 23S rRNA (adenine1618-N6)-methyltransferase
IMCC3317_41130 (rlmF)
Ribosome biogenesis [BR:
kan03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
IMCC3317_41130 (rlmF)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltransf_10
MTS
Methyltransf_4
Methyltransf_12
Motif
Other DBs
NCBI-ProteinID:
QHI38719
UniProt:
A0A7L4ZQG6
LinkDB
All DBs
Position
complement(4773940..4774866)
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AA seq
308 aa
AA seq
DB search
MDSRKKQQPIIKSKLHPLNKHRERYDFELLIKAIPELSSFVKPNKFGDESIDFFDPNAVK
MLNKALLKQYYNIDYWDIPANYLCPPIPGRADYIHYVASLLGETYQGKIPKGTAIKCLDI
GTGANLVYPIIGSQEYDWSFIASDIDVVSIENAQQIISQNKNLKDNIEIRQQTNPNQIFK
GILEHSECISITICNPPFHKSAKEALAGTTRKLQNLKGTKNAKPELNFGGQSNELWCKGG
EKKFIKNMITESKLFGKSCLWFTTLVSKEANLPAIYDALKLVNATTVKTIPMGQGNKISR
IVAWSFNL
NT seq
927 nt
NT seq
+upstream
nt +downstream
nt
atggattcaagaaaaaagcaacaaccaataataaagtcaaaattgcatccgctgaataaa
catcgggaacgctatgattttgaattgttgataaaagcaattcctgaactttctagcttt
gtaaaaccgaataagtttggcgatgaatctattgatttttttgatccaaacgctgtgaaa
atgctcaataaagcattgttaaaacagtattacaacattgattattgggatattccagcc
aattatttgtgtccgccaattcctggtagagcagattatattcattatgttgcgtcgctt
ttgggggaaacgtatcaggggaaaatcccgaaagggacagctataaaatgcttagatatt
ggcacaggcgcaaatttagtctatccaattattggttcgcaagaatacgattggtcgttt
atcgcttctgatattgatgttgtttctattgaaaatgcgcaacaaattatttctcaaaat
aaaaatttaaaagacaatatagagattcggcaacagacaaatccgaatcaaatttttaag
ggaattttagaacattctgaatgtatttcgattacgatttgcaatccgccatttcacaaa
tctgccaaagaagcacttgctggaacaactcgaaagttgcagaatttgaaaggcactaaa
aacgcaaaacctgaactaaattttggtggacaaagcaacgaattgtggtgtaaaggcggc
gaaaagaagtttattaaaaatatgattaccgaaagtaaactgtttggaaaatcgtgttta
tggtttacaacgttggtttctaaagaagcaaatttgcctgcaatttatgacgctttaaaa
cttgtgaatgcaacaacggtaaaaaccattccgatgggacaaggaaataaaattagtaga
attgtagcttggtcgttcaacttataa
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