Kordia antarctica: IMCC3317_42920
Help
Entry
IMCC3317_42920 CDS
T06371
Symbol
msbA
Name
(GenBank) Lipid A export ATP-binding/permease protein MsbA
KO
K11085
ATP-binding cassette, subfamily B, bacterial MsbA [EC:
7.5.2.6
]
Organism
kan
Kordia antarctica
Pathway
kan02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
kan00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
IMCC3317_42920 (msbA)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
kan02000
]
IMCC3317_42920 (msbA)
Enzymes [BR:
kan01000
]
7. Translocases
7.5 Catalysing the translocation of carbohydrates and their derivatives
7.5.2 Linked to the hydrolysis of a nucleoside triphosphate
7.5.2.6 ABC-type lipid A-core oligosaccharide transporter
IMCC3317_42920 (msbA)
Transporters [BR:
kan02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
IMCC3317_42920 (msbA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
Zeta_toxin
RsgA_GTPase
APS_kinase
AAA_29
AAA
AAA_22
AAA_16
AAA_24
MMR_HSR1
nSTAND3
ATP-synt_ab
AAA_25
DEAD
AAA_30
Motif
Other DBs
NCBI-ProteinID:
QHI38892
UniProt:
A0A7L4ZQL9
LinkDB
All DBs
Position
complement(5001499..5003316)
Genome browser
AA seq
605 aa
AA seq
DB search
MNYIKKILRFAIPYKKYAYLNIFFNVLYALFSTLGMVALIPMLTVLFDEGEKLTEKPIFD
GNIKDYLENYLNYFITTTSESEGEINTLMYMIILIVVLFFFRNIFGYLAMYFITFLRNGI
LKDVRNELYDKIMELPISFYSEKRKGDVIARTSADVGEIQNSFLSVLELVVKEPLTILFT
IGAMFFISPKLTLFVFIFIPVSGFIISAVGKKLKKHSENTQKEQGIFLSHLEETLGGLRV
IKGFNGESYFGDRFKESTYRFFSFSNKLLNRQNLASPISEFLGIVIIAVLLWYGGNMVLV
ENTLKASAFIAYIGLSWQILTPAKAISKASYSVKRGNAAADRVLEILETESPIADVPNAK
VKEGFNSEITLRNISFKYDETYVLKDFTLTVPKGKTVALVGQSGSGKSTIANLVTRFYDV
NEGSIEVDGENIKTLTKHSLRGLMGLVTQDSILFNETIRNNVKLGKQDATDEEVIAALKI
ANAWEFVKDLPLVLDHNVGDSGGKLSGGQKQRLSIARAVLKNPPIMILDEATSALDTESE
RLVQVALENMMKNRTSIVIAHRLSTIQNADVIVVMQKGEIVEQGTHEELISNNMVYTKLV
QMQSI
NT seq
1818 nt
NT seq
+upstream
nt +downstream
nt
atgaattatatcaaaaaaatattgcgctttgcaataccttataaaaaatatgcgtattta
aatattttctttaatgtactttacgctttgtttagcacactaggaatggttgctttaatt
ccaatgcttaccgtactttttgatgaaggagaaaaactaactgaaaaaccaatttttgat
ggtaatatcaaagattatttagaaaattatctaaattactttatcacgacaacttctgaa
tctgaaggagaaataaacacattgatgtatatgatcattttgattgtcgtgctgtttttc
tttagaaacatatttggctacttggcaatgtattttattacatttttacgaaacggaatt
ttgaaagatgttcgaaatgaattgtatgataaaatcatggaattaccaatttctttttac
tcagagaaaagaaaaggtgatgtcattgcgcgtacttctgctgatgtaggagaaattcaa
aactcgtttttatccgtattggaacttgtagttaaagaacctttgacaattttatttacg
attggcgctatgtttttcatcagtccaaaactgacactttttgtatttatttttattccg
gtttctggttttattatttctgcggttggaaaaaaattaaagaaacattctgaaaatacc
caaaaagaacaaggaatctttttatcacatttagaagaaacattaggaggattgcgcgtg
attaaaggatttaatggagaatcttactttggtgaccgtttcaaagaatctacgtatcga
ttttttagtttttcaaataaattattaaacagacaaaatttagcttctccaataagtgag
tttttaggaattgtcattattgctgtacttctttggtatggaggaaatatggtattggtc
gaaaatacgttgaaagccagtgcatttatcgcatatattggattatcatggcaaatttta
acaccagcaaaagcaatttcaaaagcatcttacagtgtgaaaagaggaaatgctgctgct
gatcgtgtattggaaattttagaaacagaaagtcctattgcagatgtaccaaatgcaaaa
gtaaaagaaggttttaattcagaaataacattaagaaatatttcttttaaatatgatgaa
acgtacgtattgaaagactttacactaacagttccgaaagggaaaacagttgccttagtt
ggacaatcgggaagtggaaagagtacgattgcaaatcttgtaacgcgtttttatgatgta
aacgaaggaagtattgaagttgatggcgagaatataaaaacactcaccaaacattcttta
cgtggcttaatgggactcgtaacgcaagattctatcctttttaatgaaacgattcgtaat
aacgtgaaacttggaaaacaagacgcaaccgacgaagaagtgattgctgcattgaaaatc
gcaaatgcgtgggaatttgtaaaggatttacctctagttctcgatcataatgtgggagat
tctggtggaaaattatctggaggacaaaaacaacgtttgagtattgccagagccgtttta
aagaatccgccaattatgattttggatgaagcaacttctgcactagataccgaaagcgaa
cgtttggtacaagtcgcgcttgaaaatatgatgaagaatagaacttccatcgtcattgca
catagattgtctacgattcagaatgcagatgtgattgttgtgatgcaaaaaggcgaaatt
gtagaacaaggaacgcatgaagagttgattagcaacaatatggtgtatacgaagttggtg
cagatgcagtcgatatag
DBGET
integrated database retrieval system
