Kordia antarctica: IMCC3317_43620
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Entry
IMCC3317_43620 CDS
T06371
Symbol
cca
Name
(GenBank) Multifunctional CCA protein
KO
K00974
tRNA nucleotidyltransferase (CCA-adding enzyme) [EC:
2.7.7.72
3.1.3.- 3.1.4.-]
Organism
kan
Kordia antarctica
Pathway
kan03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
kan00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
IMCC3317_43620 (cca)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
kan03016
]
IMCC3317_43620 (cca)
Enzymes [BR:
kan01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.72 CCA tRNA nucleotidyltransferase
IMCC3317_43620 (cca)
Transfer RNA biogenesis [BR:
kan03016
]
Eukaryotic type
3'processing and CCA adding factors
CCA adding factors
IMCC3317_43620 (cca)
Prokaryotic type
IMCC3317_43620 (cca)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_RNAbd
HD
MIOX
tRNA_NucTran2_2
Cas3_HD
Ppx-GppA_III
Motif
Other DBs
NCBI-ProteinID:
QHI38962
UniProt:
A0A7L4ZQU1
LinkDB
All DBs
Position
complement(5082026..5083441)
Genome browser
AA seq
471 aa
AA seq
DB search
MNYKEALQLDIFSTISKAATELQLETYVIGGFVRDFLLKRGDAKDIDIVAVGSGIALAKK
VASLLPGKPKVQVFKSYGTAMIKTKEIEIEFVGARKESYERGSRNPAVENGTLQDDQNRR
DFTMNAMALSLNETTFGDLLDPFNGLQDLEDQRIVTPLDPDITYSDDPLRMMRAIRFASQ
LNFTIDAVSLEAITRNSNRIEIISEERIVVELNKILLSNTPSTGFILLEKTNLLGHILPE
LVALKGIDEKDGQTHKDNFYHTLEVVDNISENTNDVWLRWAALLHDIGKAPTKRFHKKIG
WTFHGHEFIGGKMVRKLFKRLKMPLNEKVKFVEKMVMMSSRPIVLSQDGVTDSAVRRLVF
DAGDYVEDLMTLCEADITTKNPRKFNKYHNNFKIVREKIVEVEERDHVRNFQPPVSGEEI
MEAFNLKPSREIGIIKDAIKEAILEGEILNEHEAAYQFMLAKGKELGLVKN
NT seq
1416 nt
NT seq
+upstream
nt +downstream
nt
atgaattacaaagaagcattacaactcgatatattttcaacaatttcaaaagcagcaacc
gaattacagcttgaaacgtatgtaattggtggttttgtgcgtgattttttattgaaacgc
ggcgacgcaaaagatattgacattgttgctgttggaagcggaattgcgcttgccaaaaaa
gtagcttcacttcttcctggaaaaccaaaagtacaagtgtttaaaagttatggtactgcc
atgattaaaacgaaagagattgagatcgagtttgtaggcgcacgaaaagaaagttacgaa
cgcggaagtagaaatcctgcggtggaaaatggaacgcttcaagatgatcaaaatcggcgc
gattttacaatgaatgcaatggcgttaagcctgaacgaaaccacttttggagatttactc
gatccgtttaacggtttgcaagacctagaagatcaacggattgtaacgccacttgatcct
gatattacgtattcggacgatccgttacgaatgatgcgcgccatccgatttgcttctcaa
ttaaattttactattgatgcggtttcgttggaagcaattacacgaaattccaatcggatt
gagattatttcggaagaacgaattgtggtcgaattgaataaaattttattaagtaataca
ccttcaactggttttatattattagaaaaaactaaccttttaggtcatatattaccagaa
ttagtcgctttaaaaggaattgacgaaaaagatgggcaaacacataaagacaatttttat
cacacgttggaagtcgtagataatatttctgaaaacacaaatgatgtttggttgcgttgg
gcagctttgttacacgatattggaaaagcgccaaccaaacgttttcataaaaagattggt
tggacatttcatggacatgaatttattggtggaaaaatggttcgtaaactctttaagcgt
ttgaaaatgccactgaatgaaaaagtgaagtttgttgaaaaaatggtgatgatgagttcg
cgaccaattgtgttatcacaagatggagttacggattctgcggttcgtcgtttggtattt
gatgcaggcgattatgtcgaagatttgatgacactttgcgaagcagatatcactacaaaa
aatcctagaaagtttaataagtatcacaataatttcaagattgttcgtgagaagattgtg
gaagttgaagaacgcgatcatgtgcgaaattttcagccgccagtttctggtgaagagatt
atggaagcttttaacttgaaaccttcccgagaaatcggaatcattaaagatgctattaaa
gaagccattttagaaggcgaaattctaaatgaacacgaagcagcatatcaatttatgctt
gccaaaggaaaagaattaggtttagtcaaaaactaa
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