Kaistella sp. 97-N-M2: L0B70_00665
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Entry
L0B70_00665 CDS
T08605
Symbol
gyrB
Name
(GenBank) DNA topoisomerase (ATP-hydrolyzing) subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
kaq
Kaistella sp. 97-N-M2
Brite
KEGG Orthology (KO) [BR:
kaq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
kaq03032
]
L0B70_00665 (gyrB)
03400 DNA repair and recombination proteins [BR:
kaq03400
]
L0B70_00665 (gyrB)
Enzymes [BR:
kaq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
L0B70_00665 (gyrB)
DNA replication proteins [BR:
kaq03032
]
Prokaryotic type
DNA Topoisomerases
L0B70_00665 (gyrB)
DNA repair and recombination proteins [BR:
kaq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
L0B70_00665 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
UJF29940
LinkDB
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Position
122349..124283
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AA seq
644 aa
AA seq
DB search
MSQKEYTASSIQALEGMEHVRMRPSMYIGDVGLRGLHHLVYEVVDNSIDEALAGHCDTIS
VVIHEGESITVKDNGRGIPVDMHEKEQKSALEVVMTKIGAGGKFDKDSYKVSGGLHGVGV
SVVNALSNSLIATVNRDGKTYQQKYSKGKALADVEEIGKTTERGTEVFFQADDTIFQELI
FNYDTLASRMRELSYLNKGIKITLTDERVREEDGTAKHDIFFSEGGLKEFVEYIDGNRES
IMNSVIFMEGEKDNIPVEVAMRYNTSYTENLHSYVNNINTHEGGTHLAGFRRALTRTLKK
FADELGLPAKEKVEVTGDDFREGLTAVISVKVMEPQFEGQTKTKLGNSEVSGAVDKIVGE
MLSNFLEENPNEAKLIVQKVVLAAKARQAAKKARELVQRKSPMGGSGLPGKLSDCSSKDP
EISELFLVEGDSAGGTAKQGRDRHFQAILPLRGKILNVEKSMVHKVYDNEEIKNIYTALG
VSVGTEEDSKALNIAKLRYHKVVIMCDADIDGAHISTLILTFFFRYMKELIENGYIYIAQ
PPLYLLKKGNKKLYAYNEKEREEITLEMAPDGKGVEVQRYKGLGEMNPEQLWETTLNPEN
RMLKQVNIESLAEADNVFSMLMGDEVPPRREFIEKNAIYAKIDV
NT seq
1935 nt
NT seq
+upstream
nt +downstream
nt
atgagtcaaaaagaatatacagcaagtagcatccaggccctcgaaggaatggaacacgta
agaatgagaccgtccatgtacattggcgacgtgggtttaagaggtttgcatcacttggtt
tatgaggttgtggataactccattgatgaagctttggcaggacattgcgacactatttcc
gttgttattcacgagggcgaaagcattaccgtaaaagacaatggccgcgggattcctgtg
gatatgcacgagaaagaacagaaatctgctttggaggttgtaatgaccaaaattggagcc
ggcggaaaattcgataaagattcttataaagtttccgggggacttcacggtgttggggtt
tccgttgtaaacgcattgtccaattccttaattgcaaccgttaacagagacggcaaaact
tatcagcaaaaatactccaaaggaaaagctttagcagatgttgaggaaattggcaaaacc
accgaacgtggaaccgaggttttctttcaggcagatgatacgatttttcaggaactgatt
tttaattatgacacgttggcgagcagaatgcgcgaactttcttatctgaacaaaggcatt
aaaataactttaacagacgaaagagtacgggaggaagacggcactgcgaagcacgatatt
ttcttttctgaaggcgggttgaaagaatttgtagaatatatcgacggtaaccgcgagagc
atcatgaacagcgttattttcatggaaggggaaaaagataatattcctgtagaagttgcc
atgcgatacaacacttcttacaccgaaaatctgcattcttacgtcaataacatcaataca
catgaaggtggaacgcacctcgccggttttagaagagctttgacaagaacgctgaagaag
tttgcagatgaattagggcttcccgcgaaagaaaaagtagaagtaacgggagacgatttc
cgcgagggtttaactgccgttatttctgtaaaggtgatggaacctcagtttgaaggccaa
accaaaaccaaattaggaaactccgaagtttccggcgccgtagataaaattgtgggcgaa
atgctttccaactttttagaggaaaatccaaacgaagcaaaactcatcgttcagaaagtg
gttttagcggcaaaagcaagacaggcggcgaaaaaagccagagaacttgttcagcgcaaa
tcaccgatgggtggcagtggattacccggaaaattatccgactgttcttccaaggacccg
gaaatttccgaattattcctggtagagggagattcggcaggtggtacggcaaagcaaggc
cgggaccgtcatttccaggcgattttgcctttaagaggtaaaattctgaacgtggaaaaa
tctatggttcataaagtgtacgacaacgaagagattaaaaatatttatacggcacttggc
gtttctgtaggcaccgaagaagacagcaaagctttgaacattgcgaagttgcgctaccac
aaagtagtaatcatgtgtgatgccgatattgacggtgcacacatttctacgctgatcctt
acttttttcttcagatacatgaaggaacttattgaaaacggttacatttatatcgcgcag
ccgccactttatctgctgaaaaaaggaaacaaaaaactgtacgcctataacgaaaaagaa
cgggaggaaattacgctggaaatggcaccagacggaaaaggcgttgaagttcagcggtac
aaaggtctgggagaaatgaatcccgagcagctttgggaaaccactttgaatccggaaaac
cgaatgctgaaacaggtgaatatcgaaagtcttgccgaagcagataacgttttctccatg
ttgatgggtgatgaagtaccgccaagacgggagtttatcgagaaaaatgccatctacgca
aaaattgatgtttag
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