Kaistella sp. 97-N-M2: L0B70_01125
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Entry
L0B70_01125 CDS
T08605
Symbol
recQ
Name
(GenBank) DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
kaq
Kaistella sp. 97-N-M2
Pathway
kaq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
kaq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
L0B70_01125 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kaq03019
]
L0B70_01125 (recQ)
03400 DNA repair and recombination proteins [BR:
kaq03400
]
L0B70_01125 (recQ)
Enzymes [BR:
kaq01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
L0B70_01125 (recQ)
Messenger RNA biogenesis [BR:
kaq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
L0B70_01125 (recQ)
DNA repair and recombination proteins [BR:
kaq03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
L0B70_01125 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
RecQ-1-like_HTH
Helicase_C
RQC
HRDC
RecQ_Zn_bind
ResIII
HTH_40
Motif
Other DBs
NCBI-ProteinID:
UJF30027
LinkDB
All DBs
Position
complement(223600..225804)
Genome browser
AA seq
734 aa
AA seq
DB search
MKTKSADLSKELKKYFGFSKFKGQQEDIIKNLLEGRDIFVLMPTGGGKSLCYQLPALMCE
GTAIVVSPLIALMKNQVDAVNGLSSNEGVAHVLNSSLNKTQTKQVFDDIRAGKTKLLYVA
PESLIKEEYMEFLRDVEISFVAIDEAHCISEWGHDFRPEYRNLKTIIDKIADVPVIALTA
TATPKVQDDIQKTLGMSQALVFKESFNRPNLFYEVRPKVNIDREIVKFVNQYKGRSGIVY
CLSRRKVEEFAQLLQVNGINALPYHAGLDQKTRVMNQDKFLMEEADIIVATIAFGMGIDK
PDVRFVIHYDIPKSLESYYQETGRAGRDGGEGYCLAFYDPKDIEKLEKFLAQKPVSEREI
GLQLLNEVVGYAETSMSRRQYILCYFGEAFDPVNGDGAQMCDNSVNPPQLKDATKELKLV
LSLVKDLEEKFRTKDLISVLVGKENPVTKSYKLETTKHFAIGKKEDENFWKSVIRQATVQ
NFLQKDIETYGVLKVTEKGQNVINGKDKNAFCIAEDREYNLAQTKADSDQVQVKQSGGLD
ENLFSQLKELRKNVAKKQGIPPYTVFMDPSLEDMTVQYPVSIEEMGKIYGVGEGKAKKFG
KEFADFIKKYVDENAIERTQDMVLKQVANKSSHKVFIIQSTDKKIDLEDIAKAKNLSMDD
LLKEMERIVYQGTKLNIDYYIDENFDEDVVEEFMDFMKSSESDSMKVLLAEFGDDLSDEE
VRMLRIKFISDVAN
NT seq
2205 nt
NT seq
+upstream
nt +downstream
nt
atgaaaacaaaaagtgccgatctctcaaaagaactcaaaaaatatttcggcttttcaaag
tttaaaggtcagcaggaagatataatcaaaaatttattagaaggtagagacatttttgtt
ttaatgccaacaggtggtgggaaatccttgtgttatcagcttcccgctttaatgtgtgaa
ggaacagctattgtggtgtctcctttaattgcactgatgaaaaatcaggtggatgccgtg
aacggactttcttccaacgaaggtgtagcacatgtactgaactcttccttaaataaaacg
caaaccaagcaggtcttcgacgatatacgcgccggtaaaacaaaattgttatacgtggca
cccgaatctttaattaaagaagaatacatggaatttctacgcgacgtcgaaatttctttt
gttgcgatcgacgaagcacactgtatttcagagtgggggcatgatttccgccccgagtac
cgcaatcttaaaaccattatcgacaaaatcgccgatgttcctgttattgctttaactgcc
acggcgacgccgaaagtgcaggatgatattcagaaaacgctgggaatgtcgcaggccctg
gtttttaaagaaagttttaaccggcccaatcttttttacgaagttcgccccaaggttaat
atcgaccgcgagatcgttaaatttgtgaaccaatataaaggaagatccggaattgtttat
tgtttgagtcgccgaaaggtagaagaatttgcgcagcttttgcaggtcaacggcatcaac
gcacttccgtaccatgcgggtttagaccaaaaaacaagggtgatgaatcaggataaattt
ctcatggaggaagcagatattatcgtggcaaccatcgcttttgggatgggcatcgataaa
cccgatgtgcgcttcgttattcattacgatattccaaagtctctggagagttattatcag
gaaacggggagagccggcagagatggcggcgaaggttactgtttggccttttatgatcca
aaagatattgaaaaattagaaaaatttttggcccaaaaaccggtttccgaacgggagatt
ggcttgcaactcttgaatgaagtcgtgggttacgccgaaacctcgatgagccgccgtcag
tatattttgtgctattttggggaagctttcgatcctgttaatggtgatggtgcacaaatg
tgtgacaattccgttaatcctccgcagcttaaagatgccacgaaagaattaaaactggtg
ctaagtctggtgaaggatctggaggaaaagttcaggaccaaagatttaatttccgtattg
gtgggaaaggaaaatccggtaaccaaatcctacaaactcgaaacgacgaaacattttgcc
attggaaaaaaagaagacgaaaatttttggaaatctgtgatccgacaggcgaccgtacag
aattttttgcagaaagatatcgaaacttacggcgttctgaaagtcactgaaaaaggacag
aacgtgatcaacgggaaagataaaaacgcgttttgcatcgctgaagaccgcgaatataat
ttggcccagacaaaagccgattccgatcaggttcaggtaaagcaaagtggcgggctggat
gaaaacttattcagccagttaaaagaactgcgaaaaaatgtggcaaaaaagcagggcatt
ccaccctacacggtttttatggatcccagtttggaagatatgaccgtgcaatatccagtc
agcattgaggaaatgggtaaaatttatggcgtgggcgaaggaaaagccaaaaaattcggt
aaggaattcgccgatttcatcaaaaaatatgtagacgaaaatgccattgaacgcacacag
gatatggtactgaaacaggtggcgaataaatcttcgcacaaagtttttattattcaaagt
accgacaagaagattgatctggaagatattgcaaaagcaaaaaatctttctatggacgat
ctgctgaaagaaatggaacgcatcgtttaccaggggaccaaattaaatatcgactattac
attgatgaaaatttcgatgaagacgttgtggaagaatttatggattttatgaaaagcagc
gaaagcgacagcatgaaagttcttttggcggaatttggcgacgatttaagcgatgaagaa
gtacggatgctgagaattaaatttatttcagacgttgcaaattaa
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