Kaistella sp. 97-N-M2: L0B70_02135
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Entry
L0B70_02135 CDS
T08605
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
kaq
Kaistella sp. 97-N-M2
Pathway
kaq03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
kaq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
L0B70_02135 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kaq03400
]
L0B70_02135 (uvrA)
DNA repair and recombination proteins [BR:
kaq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
L0B70_02135 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
L0B70_02135 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrA_inter
ABC_tran
SMC_N
UvrA_DNA-bind
nSTAND1
AAA_16
AAA_29
RsgA_GTPase
DnaJ_CXXCXGXG
nSTAND3
AAA_25
ATPase_2
AAA_21
AAA_15
Motif
Other DBs
NCBI-ProteinID:
UJF30219
LinkDB
All DBs
Position
complement(439056..441896)
Genome browser
AA seq
946 aa
AA seq
DB search
MKDSKEYIEVYGAREHNLKNIDVKIPRNELVVITGLSGSGKSSLAFDTIFAEGQRRYIET
FSAYARQFLGGLERPDVDKIDGLSPVIAIEQKTTNKNPRSTVGTVTELYDYLRLLFARVS
DAYSLNSGKKLVSYTEDQILDAITKNYKGEKVMLLAPVVRSRKGHYHELFIQMSKKGYGQ
ARIDGELLDIEYDLKLDRYKTHDIDIVIDRWIIGESASEKRMEQSLKTALHMGEGVIGIQ
KLGSTEIDYFSKNLMDAESGQSLALPEPNTFSFNSPKGSCPYCKGLGTVKKVNTDYFVEN
PKLSINQSGLLPLEDMKSNKWVLGQIKNILEIFGLSLGTPFKDIPEEALEYMYHGCHKEF
NKDLKYAGISKKIKVNFDGLVPIINEMIEDKESYDAILLERHFTTEETCPECKGTRLQPS
SLSFKIDGRNIAEINALSLSDLKIWLNEVEETFSDKNKIIAHEILKEIKTRLQFLLDVGL
EYLSLSRSSRTLSGGESQRIRLATQIGSQLVNVLYILDEPSIGLHQRDNERLIASLKNLR
DIGNSVIVVEHDKDMIMEADEVLDIGPRAGKFGGEILWQGKPEDLLKADTITADYITGKR
KIEIPETRREGNGKSIVLKGATGNNLKNVNLEIPLGKLVVVTGISGSGKSSLINGTLYPI
LNRHFYRSVQEPLPYKKIEGIDNIDKIVDVDQTPIGRTPRSNPATYTGMFTDIRNLFAEL
PESKIRGYKAGRFSFNVKGGRCETCQGGGLKVIEMNFLPDVYVHCETCNGKRFNRETLEV
RYKGKSISDVLEMTIDEATEFFQPIPKIYARVKTMQDVGLGYITMGQQSTTLSGGEAQRI
KLATELSKRQTGNTLYILDEPTTGLHFEDVKILMEAINKLVDLGNSFIIIEHNLDVIKLA
DYIIDVGPEGGKHGGEIIAKGTPEELIKSRKSLTAKYLKKELQQDI
NT seq
2841 nt
NT seq
+upstream
nt +downstream
nt
atgaaagattccaaagaatatatcgaagtttacggcgcccgtgaacacaatttaaaaaat
attgacgttaaaatcccccgcaacgaacttgttgtgattacgggactttccggcagcggc
aaatcttccctggcttttgataccatttttgcagaaggccaaagaagatacatcgaaacc
ttttctgcctacgcgagacagtttttgggcgggctggagcgtccggatgtcgacaagatc
gacggactttctcccgttatcgccatcgagcagaagaccacgaacaaaaatccacgttcc
accgtaggaaccgtaaccgaactttacgattatctgcgtttgcttttcgccagagtttca
gatgcgtattccttaaactcgggaaaaaaactcgtgagttataccgaagatcaaatcctc
gacgccatcaccaaaaattataaaggcgaaaaagtaatgcttttggcgcccgttgttcgg
tcccgaaaaggacattaccacgaactttttatccagatgtccaaaaaaggctacggccag
gcccgaattgatggcgaactgctggatattgagtacgacttaaaactcgaccggtacaaa
acccacgatatcgatatcgtgatcgaccgctggatcattggcgaaagcgcctccgaaaaa
cgcatggagcagtcgctgaaaaccgcgctgcacatgggcgaaggcgtgatcggaattcaa
aaattgggcagtacggagatcgattatttttccaaaaatttaatggatgccgaaagtggc
cagtccctcgccttgccggagccgaatacattttctttcaattccccgaaaggcagctgt
ccgtactgcaaaggattaggcaccgtaaaaaaggtaaacaccgattactttgtcgaaaat
ccaaaactgtccatcaaccaaagcggtttgctgcctttggaagacatgaaatccaacaag
tgggttttgggtcagatcaaaaatattctggagattttcggcctgagtttggggacacct
ttcaaagatatccccgaagaagcactggaatacatgtatcacggctgtcacaaagaattc
aataaagatctgaagtacgccggcatatcgaaaaaaataaaagtcaatttcgacggtctg
gtaccgattatcaacgagatgatcgaagataaagagagctacgatgcgattttgctcgag
cggcatttcactacggaagaaacctgtcccgaatgtaaaggaacaaggcttcagccttca
agtttaagttttaagatcgatgggcgcaatattgcggaaatcaacgcactttccctgtcg
gatctgaaaatctggctgaatgaggttgaagaaaccttcagcgataaaaataaaattatc
gcccacgaaattctaaaggaaattaaaacacgcctgcagtttctgctcgatgttggtttg
gaatatttaagcttaagccgaagttcgcgaacgctttcgggcggcgaatcccaacggatc
cggttggcaacacagatcggttctcagttggtaaacgtactgtatattttagatgaacct
tccataggtttgcaccaaagagataatgaaaggctcatcgcgtcgctgaaaaatttacgc
gacatcggaaattcggtgatcgtggtcgaacacgacaaagacatgattatggaagcggat
gaggttctggatatcgggccacgcgccggaaaatttggtggcgagatcttgtggcaggga
aaaccggaagatctgctcaaagccgatacaattaccgcagattatatcacaggaaaacgc
aaaatcgaaatccccgaaacccgaagagaaggcaacggcaaatccatcgtcttgaaaggc
gccaccggaaacaacctgaaaaacgtcaatctcgaaattcccctgggaaaactcgtcgtc
gttacgggtatttccggcagcggaaaatcttcgttgatcaacggaactttatatccgatt
ctgaaccgtcacttctaccgcagcgttcaggaacctttgccttataaaaaaatcgaaggc
atcgacaatatcgacaaaattgtggatgtcgatcaaacgcccatcggccgaacgccgcgt
tccaatcccgcaacttatacgggaatgtttacggatatcagaaatctttttgcagagttg
cccgaatccaagatccgtggttacaaagccggccggttttctttcaatgtgaaaggtggc
cggtgcgaaacctgtcagggcggcggcttgaaggtcatcgaaatgaatttcctgcccgat
gtttacgtacactgcgaaacgtgtaacggaaaacgctttaaccgcgaaactttggaagtc
cgctacaaaggaaaatcgatttccgatgttctggaaatgacaattgacgaggcgaccgaa
tttttccagccaattccaaaaatttacgcccgcgtgaaaaccatgcaggatgtcggtctc
ggatatatcacaatggggcagcaatctacaactttgagtgggggcgaagcgcagcgcatt
aaactcgccaccgaattatcgaaaagacaaaccggaaatacgctgtatattttagatgag
ccgactaccggtctccacttcgaggacgtgaaaattttgatggaagccattaataaactc
gtcgatttgggaaattcctttatcatcatagaacacaatctcgatgtcatcaagctggca
gattacatcatcgatgtgggtccggaaggcggcaaacacggtggtgaaatcatcgcgaaa
ggaacgccggaagaactgataaaatcgagaaaaagtttaacagcaaaatatttgaaaaag
gaacttcaacaggatatttga
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