Kaistella sp. 97-N-M2: L0B70_03495
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Entry
L0B70_03495 CDS
T08605
Symbol
rlmD
Name
(GenBank) 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
KO
K03215
23S rRNA (uracil1939-C5)-methyltransferase [EC:
2.1.1.190
]
Organism
kaq
Kaistella sp. 97-N-M2
Brite
KEGG Orthology (KO) [BR:
kaq00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
kaq03009
]
L0B70_03495 (rlmD)
Enzymes [BR:
kaq01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.190 23S rRNA (uracil1939-C5)-methyltransferase
L0B70_03495 (rlmD)
Ribosome biogenesis [BR:
kaq03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
L0B70_03495 (rlmD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA_U5-meth_tr
Methyltransf_31
Methyltransf_25
TRAM
Cons_hypoth95
TRM5-TYW2_MTfase
Methyltransf_11
MTS
Methyltransf_15
Methyltransf_2
N6_N4_Mtase
PCMT
RrnaAD
2-ph_phosp
PrmA
Methyltransf_12
NpmA
Motif
Other DBs
NCBI-ProteinID:
UJF30467
LinkDB
All DBs
Position
complement(717072..718481)
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AA seq
469 aa
AA seq
DB search
MRKKNKNIVLENIRMVSAGAKGIAVGRTAEGKTVLVSGAVPGDLVNVRVKKSKSKYFEAE
AIEILEPSPFRVEPKCIHFGVCGGCKWQNLSYEKQLDIKNDEVYNNIKRIGGVEDFETLP
ILGSEEQYFYRNKMEFSFSNARWLTQYEISSEENFGNRDALGFHIPGMWSKILDLKECLL
QEDPSNAIRLAVKNYAVKNGLEFFDVKEQKGFLRTLMLRQNSKGEWMVLFQLFREEKENR
KNLFDYLLAEFPQITTLVYCINSKQNDSIYDQDVQTYFGEGFIMEEMDGLQFKIGPKSFF
QTNYKQALELYRKTLEFADLQGTEVVYDLYTGTGTIAQYVARNAQHVIGIESVPEAIEAA
RAHAELNGLSNCTFYCGDMKEIFNDEFLSLHPKADVLITDPPRDGMHQKVVEQILKLSPE
KIVYVSCNSATQARDIALMKDHYRLVKILPVDMFPQTHHVENIALLVKI
NT seq
1410 nt
NT seq
+upstream
nt +downstream
nt
atgagaaagaaaaataaaaatatagttctagaaaatatccgaatggtttctgcaggagcc
aaaggcatcgccgttggcagaacagcagaaggaaaaaccgttttggtttccggcgccgtt
ccgggagatctggtaaatgtgcgcgtgaaaaaatcaaaatcaaaatattttgaagccgaa
gccattgaaattttggagccctcgccctttcgtgtagaacctaaatgtattcatttcggt
gtttgtggcggttgcaaatggcagaatctttcctacgaaaaacagctggacattaaaaat
gatgaggtgtacaataacatcaaaagaattggcggcgttgaagatttcgagacgttacca
attttaggcagcgaagagcagtatttttaccgcaataagatggagttttccttctccaac
gcccgctggctgacgcaatatgagattagttccgaagaaaactttggcaaccgagatgct
ttaggttttcacattccgggcatgtggagcaagattttagatctgaaggaatgtcttctg
caggaagatccttccaatgccattcggctggccgtaaaaaactacgccgtaaaaaatggt
ttggagttttttgatgtaaaagaacagaaaggatttttgcggactttaatgctgcgtcag
aattcaaaaggcgaatggatggttttatttcagcttttccgtgaagaaaaggaaaaccga
aagaatttatttgactatttactcgcggaatttccgcaaatcaccacattggtttactgc
atcaattccaaacaaaacgattcaatttacgatcaggacgttcaaacctatttcggcgaa
ggctttattatggaagaaatggatggtttgcagtttaaaattgggccaaaatcttttttt
caaaccaattacaaacaggctttggaactctaccgcaaaaccctggaatttgccgatcta
caaggtaccgaagtcgtttacgatttatacaccggaacaggaaccatcgcgcagtatgtt
gcaagaaatgcccagcacgttattgggatcgaatcggttccggaagccattgaggcagca
agagcgcacgcagaactgaacgggctgagtaactgtactttctattgcggcgatatgaaa
gaaattttcaatgatgaatttttgtcgctgcatccaaaagcagatgtcttaattaccgat
ccgccaagggacggaatgcaccagaaagtggtggagcagatcctgaagctttccccggag
aaaattgtttatgtgagctgcaattcggccacacaggcgagagacatcgctttgatgaaa
gatcactatcgtttggtaaaaattcttcccgtagatatgtttccacaaacgcatcacgta
gagaatattgcacttttggtgaaaatttaa
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