Kaistella sp. 97-N-M2: L0B70_03625
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Entry
L0B70_03625 CDS
T08605
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
kaq
Kaistella sp. 97-N-M2
Pathway
kaq03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
kaq00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
L0B70_03625
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
kaq03021
]
L0B70_03625
03400 DNA repair and recombination proteins [BR:
kaq03400
]
L0B70_03625
Enzymes [BR:
kaq01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
L0B70_03625
Transcription machinery [BR:
kaq03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
L0B70_03625
DNA repair and recombination proteins [BR:
kaq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
L0B70_03625
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_L
RNA_pol_A_CTD
RNA_pol_L_2
Motif
Other DBs
NCBI-ProteinID:
UJF30491
LinkDB
All DBs
Position
complement(744312..745307)
Genome browser
AA seq
331 aa
AA seq
DB search
MAILTFIKPDKVILLNSDDFKGQFEFRPLEPGFGLTIGNALRRVLLSSLEGYAISSIKIE
GVEHEFSTIPGVIEDVTEIILNLKQLRLKAKTESAAAEVVTAKVSGQTTVTAGDLGKTIQ
GFEILNPDLVICNLNKDVKFEITFNVDQGRGYVPSDQNKSSNAAIGTIAIDSIFTPIKKV
QYSVENYRVEQKTDYEKLVLDIETDGSISPQNALTEASKILIYHFMLFSDERITLETEAV
KASIQYDEETLHTRQLLKSKLTDMDLSVRALNCLKAAEVETLGELVSYTKSDLMKFRNFG
KKSLTELEELVHAKGLNFGFDVAKYKLDADK
NT seq
996 nt
NT seq
+upstream
nt +downstream
nt
atggcaattttaacatttattaaacccgataaagtaatccttcttaactccgatgatttc
aaaggtcaatttgaattcagacccttggagccaggttttggattgaccatcggtaatgct
ttgagaagagtattgctttcttctcttgaaggatatgctatttcctctatcaaaatagaa
ggcgtagagcacgagttttcaacaattccaggtgttattgaagatgttacagaaatcatt
ctgaacttaaaacaactgagacttaaagcaaaaacagaatctgctgcggcagaggttgta
accgctaaagtttccggtcaaactacagtaactgcaggagatttaggaaaaacaattcag
ggtttcgaaattttgaaccccgatttggtgatctgtaatcttaacaaggatgtgaaattt
gaaattacattcaacgtagatcaaggaagaggttatgttccatcggatcaaaacaaatcg
agcaatgctgccatcggtaccatcgccatcgactctatctttactccgatcaaaaaagtg
cagtacagtgttgagaattatcgtgtagagcaaaaaacagactacgaaaaactcgttttg
gatattgagaccgatggctccatcagccctcaaaatgctttaactgaagcttccaagata
ttaatttatcatttcatgttgttctccgacgagagaattactttggaaactgaagccgta
aaagcctccattcaatacgacgaagaaacattacatacaagacagctccttaaatctaaa
ttaacggatatggatctttctgtaagagcactaaactgcttgaaagctgccgaagtggaa
actttgggagaactggtttcttataccaagtctgatttgatgaaattcagaaatttcggt
aaaaaatctttaacagaattagaagaattagtgcatgcaaaaggtctgaacttcggtttc
gacgttgctaaatataaattagacgctgacaaataa
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