Kaistella sp. 97-N-M2: L0B70_09265
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Entry
L0B70_09265 CDS
T08605
Symbol
rny
Name
(GenBank) ribonuclease Y
KO
K18682
ribonucrease Y [EC:3.1.-.-]
Organism
kaq
Kaistella sp. 97-N-M2
Pathway
kaq03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
kaq00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
L0B70_09265 (rny)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kaq03019
]
L0B70_09265 (rny)
Messenger RNA biogenesis [BR:
kaq03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
L0B70_09265 (rny)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_Y_N
HD
KH_1
HDOD
KH_KhpA-B
KH_2
DUF4954
EIF4E-T
KH-I_KHDC4-BBP
Motif
Other DBs
NCBI-ProteinID:
UJF29034
LinkDB
All DBs
Position
1967179..1968750
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AA seq
523 aa
AA seq
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MTTTAIIVGIVCLVLGAVIGILFSKSGLNAKAKFIVEDAKKNAENLLEKATVQAESIKKD
KHLQAKEKFMELKSQHDSDIQAREKKMQDSEKRIKDKEQKLNDDLSKAGKLEKELDRQIT
DYGKKHEILERKQQELDAVTAQKVEILEKISGYSAEDAKTELVEALKAEAKTRAQAHVQS
IMEEAHLNAKQEAKKIVIQTIQRIGTEQAIENSVSVFNIESDEVKGRIIGREGRNIRALE
AATGVEIIVDDTPEAILLSCFDPVRREIARLSLHRLVTDGRIHPARIEEVVDKTKKQIEE
EIIEVGKRTVIDLGVHGLHPELVKIVGRMKFRSSYGQNLLQHSREVANIAATMAAELGLN
VKLAKRAGLLHDIGKVPEQESELPHALLGMQWAEKYGESPEVINAIGAHHDEVEMTGLLS
PIIQVADAISGARPGARRQVLESYIQRLKDLEAAALSFDGVSSAYAIQAGRELRVMVESG
KVSDNQSAQLSYDISEKIQNELTYPGQVRVTVIRETRSVNIAR
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atgacaacaacagcgattatcgtcggtattgtttgcctggttttaggagcggttattgga
atcttgttttccaaaagcggccttaacgccaaagcaaaattcatcgtggaagacgcgaaa
aaaaatgccgaaaatcttctagagaaagcgactgtacaagccgaatccatcaaaaaggac
aaacaccttcaggcgaaagaaaaatttatggaactgaaatctcagcacgactcagatatt
caggccagagaaaagaaaatgcaggattcggaaaaacgaataaaagacaaagagcaaaag
cttaatgatgatcttagcaaagccggaaaattagaaaaagagttggatcgccaaattaca
gattacggtaaaaagcacgaaattttagaaagaaaacaacaggaattagatgcagttact
gcacagaaagttgaaattctggagaaaatatccggctattccgccgaagatgccaaaacc
gaattggtagaagccctgaaagcagaagcaaaaacgcgcgctcaggcgcacgttcagagc
attatggaagaggcgcacttgaacgctaagcaggaggcgaagaaaatcgtcattcaaacc
attcagcgaatcggtacagagcaggccatcgaaaattcggtgtcggttttcaatattgaa
tctgatgaggtaaaaggccgaattatcggtcgtgaaggtagaaatatccgtgctttagaa
gctgcaaccggtgttgaaattattgttgatgatacgccggaagctattttgctttcgtgt
ttcgatccggtaagaagagaaatcgcaagactttcacttcaccgtttggtaaccgacggc
cgtattcacccggcaagaatcgaagaggttgttgataaaacgaaaaaacagatcgaggaa
gaaatcatcgaagtcggcaaaagaaccgttatcgatttaggcgttcacggacttcacccg
gaattggtgaaaatcgtgggccgaatgaaattccgttcctcttatggtcagaatttattg
cagcactcccgggaggttgccaacatcgccgcaacgatggccgcggaattagggttgaat
gtgaaactggcgaaaagagccggtttactgcacgatatcggtaaagttccggagcaggaa
tccgaacttccccatgcgcttttaggaatgcagtgggccgaaaaatacggcgaaagcccc
gaagtgatcaatgcgattggcgctcaccacgatgaagtggaaatgaccggtttgctttct
ccgattattcaggttgccgatgcgatttccggagccagacccggcgcaagaagacaggtt
ttagaatcttatatccagcgtttaaaagatctggaagctgccgccttaagtttcgacggc
gtgtccagtgcctacgccattcaggcaggtagagaactgcgtgtgatggtggaaagcgga
aaagtaagcgacaatcaatcggcgcaactttcctatgatatctccgaaaaaattcagaac
gaattaacgtatccggggcaggttcgtgtgaccgtgatccgcgaaacccgttcggtgaat
attgcaagataa
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