Kaistella sp. 97-N-M2: L0B70_11175
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Entry
L0B70_11175 CDS
T08605
Symbol
uvrA
Name
(GenBank) excinuclease ABC subunit UvrA
KO
K03701
excinuclease ABC subunit A
Organism
kaq
Kaistella sp. 97-N-M2
Pathway
kaq03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
kaq00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
L0B70_11175 (uvrA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kaq03400
]
L0B70_11175 (uvrA)
DNA repair and recombination proteins [BR:
kaq03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
L0B70_11175 (uvrA)
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
L0B70_11175 (uvrA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
SMC_N
UvrA_inter
UvrA_DNA-bind
AAA_21
AAA_16
DnaJ_CXXCXGXG
nSTAND3
AAA_29
RsgA_GTPase
Viral_helicase1
AAA_18
AAA_14
nSTAND1
AAA_33
AAA_22
AAA_23
NACHT
SLFN-g3_helicase
AAA_24
NB-ARC
AAA_25
cobW
KORA
Motif
Other DBs
NCBI-ProteinID:
UJF29391
LinkDB
All DBs
Position
complement(2397433..2400219)
Genome browser
AA seq
928 aa
AA seq
DB search
MTAPTDIDIKKQLFVKNAHLNNLKHIDVLLPKNKLIVITGVSGSGKSSLAFDTIYAEGQR
RYVESLSSYARQFLGKLEKPKVDDIKGLAPSIAIQQKVISSNPRSTVGTSTEVYDYLKLF
FARVGRTYSPVSGQEVKKDSVTDVINFIQENENQTFLLRSPLNFETSQFSELLKTLKVSG
FTRLEVNENVAGIEDLESFGFVPEKGMVIHLVIDRFRYEEDESFLQRLADSIQMAFYEGH
GYCSLKNTETGTVREFSNKFELDGIEFMEPNVHFFSFNNPYGACPECEGYGKVIGIDEDL
VIPNKNLSVFEDAVASWRGESMSEWKKDFIKKNKDFPIHKPYFQLTKEQKNYLWKGDGAK
SFPSINNFFKMLEGNLYKIQYRVMLSRYRGKTLCPTCEGLRLREETKWVKIDGHNIQSMI
ELPLDEFLPLMKSLKLNQHDAEIAKRLLYEITTRLEFLDKVGLGYLTINRTSNTLSGGES
QRINLATSLGSSLVGSIYILDEPSIGLHSKDTENLIEVLKNLRDLGNTVIVVEHDEDVMR
AADYIIDIGPEAGYLGGELVFAGHFKELKESDSLTAQYLTGKLEIKIPTTRRKPKEWIHI
KGARQNNLQNIDVDIPLECLVVISGVSGSGKSTLMKEILTNDIQIQLGMGGKKGDYDSVE
FPKKLIKNIELIDQNPIGKSSRSNPVTYLKAYDDIRDLFSKQKLAKVQNLKPKHFSFNVD
GGRCDECKGEGVITVSMQFMADIELECETCHGTRFKDEILEIRFDEKNISDILHMTVDEA
LDFFKENNQDKIVTKLKPLQEVGLGYLQLGQSSSTLSGGEAQRVKLASFLVKGATTDKSL
FIFDEPSTGLHFHDINKLLKSLQALIELGHSVVVIEHQPDIIKTADYIIDIGPDAGKHGG
EIVFAGTPEDLIKNKKSHTARYLKEKLE
NT seq
2787 nt
NT seq
+upstream
nt +downstream
nt
atgactgcacctaccgatatcgatattaagaaacaacttttcgtaaaaaacgcgcatctc
aataacctgaagcacattgatgttcttttgccgaagaacaaactcatcgtcatcaccggc
gtttcgggcagtggaaaatcttccctggcgttcgataccatttacgcggaaggacaaagg
cgttatgtagaaagtttgagttcgtacgcgcggcagtttttggggaaactggagaaaccg
aaagtcgacgacatcaaaggtttagccccgtcgatcgcaattcagcaaaaagtgatttcc
tctaatccgcgttctaccgtggggacttctacggaagtttacgattatcttaaacttttc
tttgcgcgggtcggccgcacctattcgcccgtttcgggacaggaagtaaaaaaagattcc
gtcaccgacgtcatcaatttcatccaggaaaacgaaaaccagacttttcttttgagaagt
cctttaaattttgaaacttcccagttttcagaacttttaaaaacattgaaagtctccgga
tttacaaggctcgaagtcaacgaaaatgtagcaggcatcgaagatttggagagtttcggt
ttcgtgcctgaaaaaggaatggtcatccatttggtgattgaccgttttcggtacgaagaa
gatgaaagttttctgcaaaggctggcagattccatccagatggctttttacgaaggtcac
ggttattgctctttaaaaaataccgaaaccggaacagtgcgtgaattctcgaataaattt
gagctcgacggcatcgaatttatggaaccaaatgttcatttcttcagttttaataatccg
tacggcgcctgcccggagtgcgaaggctacggaaaagtcatcggcatcgatgaagatctg
gtgatcccaaataaaaatctttccgttttcgaagatgctgtggcaagttggcgcggcgaa
agtatgagcgaatggaagaaagatttcatcaaaaaaaataaagatttccctattcataaa
ccttactttcagctgacgaaagagcagaaaaattatttatggaaaggcgacggagccaaa
agttttccgtcgatcaataatttcttcaaaatgctggaggggaatttatacaaaattcag
tatcgcgtaatgctttccagataccgcggaaaaaccttgtgcccaacgtgtgaaggactg
cggctgcgcgaagaaacaaaatgggtaaaaatcgacggacacaacattcagtctatgatc
gaactgccgctggatgaatttttaccgttaatgaaatccttgaagctcaaccaacacgac
gcagaaatcgcaaaacgtttgctctacgagatcaccacacgcttggaatttttagacaaa
gtcggattaggatatttaaccatcaaccgaacttcaaacacgctatcgggcggcgaaagt
caaagaatcaatctggcaacaagtttaggaagttcgttggtaggttccatttatattttg
gacgaaccttcgatcggtctccactccaaagacacggaaaatttaatcgaagttttaaaa
aatctgcgcgatctcggcaacacggttattgttgttgaacacgatgaagacgtaatgcgg
gccgcagattacatcatcgatatcggaccggaagccggatatttaggtggtgaactggtt
tttgcggggcattttaaggaattgaaggaatcagattctttaactgcgcaatatttaacg
ggaaaactggaaattaaaattcccacaactcgacgaaagccgaaagaatggattcacatt
aaaggcgcacgccaaaataacctgcagaatatcgatgtggatattccgttggaatgtctt
gtcgttatttctggcgtttcgggcagtggaaaatcgactttgatgaaagaaattctgacg
aacgacattcagattcaactcggaatgggcggaaaaaaaggcgattacgattctgtagag
tttccaaaaaagctcattaaaaatattgaactcatcgatcaaaatcctatcggaaaatca
tcgcgctccaatcccgtgacgtatctgaaagcgtatgacgatatccgcgatcttttttca
aaacaaaaattagcgaaagttcagaatttaaaaccaaaacatttttcctttaatgtggac
ggcggcagatgtgacgagtgcaaaggtgaaggcgtgattaccgtatccatgcagtttatg
gcggatatcgaactggaatgcgaaacctgtcacggtacgcgttttaaggacgaaattctc
gagataagattcgacgaaaaaaatatttcggacatccttcacatgacggttgatgaggct
ttggatttttttaaagaaaacaatcaggataaaattgtaacgaagctgaaaccgctgcag
gaagttggtttgggttaccttcagttgggccaaagctcttctaccctttccggcggcgag
gcgcagcgcgttaagctggcgtcgtttttagtgaagggcgcaactacagataaatctctg
tttatttttgatgaaccttcgaccggtctgcatttccacgatattaacaaattgttgaaa
tccttacaggccttgattgaattgggacattcggtggtcgttatcgagcaccagcccgac
attattaaaaccgcggattatattatcgatatcggacccgatgccggaaaacacggcggc
gaaatcgtttttgcgggaacaccagaggaccttataaaaaataaaaaatcacatacagcg
aggtatctgaaagaaaaactggagtaa
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