Klebsiella africana: LGL98_02330
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Entry
LGL98_02330 CDS
T07696
Symbol
csrD
Name
(GenBank) RNase E specificity factor CsrD
KO
K18765
RNase E specificity factor CsrD
Organism
kar
Klebsiella africana
Brite
KEGG Orthology (KO) [BR:
kar00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kar03019
]
LGL98_02330 (csrD)
Messenger RNA biogenesis [BR:
kar03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
LGL98_02330 (csrD)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
GAPES4
GDPD
Motif
Other DBs
NCBI-ProteinID:
UDD40817
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All DBs
Position
481566..483506
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AA seq
646 aa
AA seq
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MRLTTKFSAFITLLTSLTIFVTLIGASLSFYNGIENKVANRVQAVATMLDNRLITTSFDR
LEPQLDELMTPIEIVHIDFMLNGKPLYSHSRPDSYRPLGSHEQFREITVPSLKHPGITLH
LVYVDPMVNYFRSLSITAPLSISIGFMVVIIFFAVRWIRRQLAGQELLELRSTRILSGER
GPQVRGSVYEWPASTSSALDMLLSELQFASDQRSRMDTLIRSYAAQDSKTGLNNRLFFDN
QLATLLEDQEKVGAYGIVMMIRLPEFDLLRDNWGRAAAEEHYFTLINLLSTFIMRYPGAL
LARYHRSDFAVLLPHRTLKEADSIAGLLLKAMDALPPTRILDRDDMMHIGICSFRSGQST
AQVMEHAEAATRNAVLQGSNSWSVYDDTLPEKGRGNVRWRTLIEQMLSRGGPRLYQKPAV
TRDGRVHHRELMSRMYDGKEEVIAAEYMPMVLQFGLAEEYDRLQVTRLLPFLGFWPEENL
ALQLSVESLIRPRFQRWLRDALMQCEKSQRQRIIFELAEADVCQYIGRLQPVMRLVNALG
VRVAVVQAGLTLVGTSWIKQLDAEVIKLHPGLARNIEKRSENQLLVQSLVEACKGMPMQV
FATGVRSRSEWLVLSQCGVTGGQGEFFAASQPLDTNVKKYSQRYSV
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atgcgattaacgacgaagttctcagcctttatcacgctgctaactagcctgaccatcttc
gtcacgctgattggtgcttcgctgagtttttataacggtattgagaacaaggtcgcaaac
cgtgtgcaggcggtggcaacgatgctggataaccggctcatcactacctcgtttgaccgg
cttgagccgcaactggatgagctgatgacgccgatcgagatcgtgcatatcgatttcatg
ctgaacggcaagccgctctacagccattcccgacccgatagctatcgcccgctcggcagc
catgagcaattccgtgagatcacggttccgtcgcttaaacatcctggtattacgctgcat
ctggtctacgttgacccgatggtgaactatttccgttcactgtcgatcacggctccgttg
tcgatctccattggcttcatggtggtgattattttcttcgctgttcgctggatccgccgc
cagttagctggccaggagctgcttgagcttcgttccacgcgcatcctgagcggcgagcgc
ggaccacaggtgcgcgggtcggtctatgagtggccggccagcaccagtagcgcgctggat
atgttgctgtcggagctgcagtttgccagcgatcagcgcagcaggatggataccctgatt
cgctcctatgcggcacaggattccaaaaccggcctgaataaccgcctgttttttgataat
cagctggccacgttactggaagatcaggagaaggtgggcgcctacggcattgtcatgatg
atccgtcttccggagtttgatttgctgcgggacaactggggacgggcggcagccgaagag
cattactttacgcttatcaacctgctctctacctttattatgcgttatcccggcgcacta
ctggcgcgctatcatcgtagcgactttgccgtgctgctgccgcatcgtacgttaaaagag
gcggatagcatcgctggactgttgctgaaggccatggacgcgctgccaccgacgcgcatt
cttgatcgtgacgatatgatgcatatcggcatttgttctttccgcagtgggcaatcgaca
gcgcaggtcatggaacatgcagaagcggcgacgcgtaatgcggtgttgcagggtagcaac
agctggtcggtctatgatgacacccttccggagaaaggccgcggtaacgtccgctggcgg
acgctgatcgaacagatgctcagtcgcggcgggccgcggttatatcaaaaacctgctgtc
acccgtgacgggcgggtgcatcaccgcgaactgatgtcgcggatgtacgacggtaaagaa
gaggtgattgcagcggaatacatgccgatggtgctgcagtttggtttggcggaggagtat
gaccgcctgcaggtgacgcgcctgctgccatttttaggcttctggcccgaggaaaacctg
gctctgcaactgtcggtagagtcgctgatccgtccgcgtttccagcgctggctgcgcgat
gccctcatgcaatgtgaaaaatcgcagcgtcagcggattatttttgaacttgctgaggca
gatgtttgtcaatatatcggccgcctgcagcccgttatgcgattggttaacgccctgggc
gttcgggtggcagtggttcaggcgggattaaccctggtgggaaccagctggatcaaacag
ctggatgcggaagtgatcaaactgcatccagggttggcgcgcaacatcgaaaagcgcagc
gagaaccagctgctggtgcaaagcctggtagaagcttgtaaaggcatgcctatgcaagtt
tttgccacgggcgtacgcagccgtagcgagtggttggtactgtctcaatgcggtgtcacg
ggcgggcagggggaattttttgccgcctcacagccacttgacacaaatgtgaaaaaatat
tcgcaaagatactcggtttga
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