Klebsiella africana: LGL98_04485
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Entry
LGL98_04485 CDS
T07696
Symbol
recB
Name
(GenBank) exodeoxyribonuclease V subunit beta
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
kar
Klebsiella africana
Pathway
kar03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
kar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LGL98_04485 (recB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kar03400
]
LGL98_04485 (recB)
Enzymes [BR:
kar01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
LGL98_04485 (recB)
DNA repair and recombination proteins [BR:
kar03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LGL98_04485 (recB)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
AAA_11
Ig_mannosidase
Motif
Other DBs
NCBI-ProteinID:
UDD41214
LinkDB
All DBs
Position
910009..913545
Genome browser
AA seq
1178 aa
AA seq
DB search
MTDTAESLDPLRLPLIGERLIEASAGTGKTFTIAALYLRLLLGLGGEAAYPRAISVEELL
VVTFTEAATEELRGRIRSNIHELRIACLRGESDNPLYSALLAEIADKDDAAKTLLLAERQ
MDEAAVFTIHGFCQRMLSLNAFESGMLFEQQLIEDESRLRYQACADFWRRHCYPLTRDIA
AVIHDVWKGPRDLLKSLDRWLQGEAPQLKSPPAPNETLAERHQQIIARIDSLKQQWREQV
GEIESVLENSGLDRRKFNRGNQGKWMERVNAWAQEETLSYQLPDALEKFAQSFLLERTKA
GGEPPVHPLFSAVESLLASSLTLTDLVLARAMVEIRDAVAREKRRRGELGFDDMLSRLDE
ALRGDSGEALASAIRQRFPVAMIDEFQDTDPQQYRIFRRIWRQQPETALLLIGDPKQAIY
AFRGADIFTYMKARGDVAAHYTLDTNWRSSPGMVGSVNRLFSLSDNPFMFREIPFLPVKA
AAKNQGLRFTVDAADVPAMNVWLMPGDTVGSGDYQTFMAQLCATQIRDWLSAGQQGRALL
WRGETSRPVQASDITVLVRNRLEAAQVREALQTLGIPSVYLSNRDSVFETLEAQELLWLL
QAVLAPERENTLRSALATSMFGLTALDIENLNQDEQAWDALVEEFSEYRQIWRQLGVMPM
LRALMTARHIAENLLATRGGERRLTDILHISELLQEAASQLESEHALVRWLAQHIAEPDS
NAASQQMRLESDKHLVQIVTIHKSKGLEYPLVWLPFIARFRKQDQAFYHDRETFAAVLDL
GQDEASLELAEAERLAEDLRLLYVALTRAVWHCSLGVAPLSSRKSGNSDFHLSALGRLLQ
AGEAMDAAGLTAQLADFCHGDIALQRPGELDLTPWQAPAATIPPLSARELQRRIADDWRV
TSYSGLQQHGFSGGQDLLPRLDVDAAGVGEVVEEPQLTPHQFPRGAAPGTFLHSLFEELD
FTQPVPDGWMAEKLQLSGFDAQWAPVLTDWLGGVLKTRLPGPDIALNQLAARDKQVEMAF
YLPIAQLLTAERLDALIRQYDPLSADTPPLDFRQVRGMLKGFIDLVFRHEGRYYLLDYKS
NWLGEDREAYTRPAMEQAMRAHRYDLQYQLYSLALHRYLRHRLADYDYDRHFGGVIYLFL
RGMDGQEGGQGIFTTRPVRPLIDGLDQLFAGETQEEAS
NT seq
3537 nt
NT seq
+upstream
nt +downstream
nt
atgaccgataccgctgagtctttggatcccctgcgcttgcccctgatcggcgagcgcctg
atagaagcctctgcgggcaccggaaaaacctttaccatcgccgcgctatatctgcggctg
ctgttggggctgggcggtgaggccgcctatccccgcgccatcagcgttgaagagctactg
gtggtgacctttaccgaggcggcgaccgaagagctgcgcgggcgtatccgcagcaacatc
cacgaactgcgcatcgcctgcctgcgcggcgaatccgacaatccgctctacagcgcgttg
ttggcggagatcgctgataaagacgacgctgcgaagacgctgctgctggctgaacggcag
atggacgaggcggcggtattcaccatccacggcttttgccaacggatgctgagccttaac
gccttcgagtcgggcatgctgttcgagcagcagctgatcgaggatgaatcccgcctgcgc
tatcaggcatgcgccgatttctggcgccgccactgctatcccctgacccgtgatatcgcg
gcggtgatccacgacgtctggaaagggccgcgcgatctgctgaagtcccttgaccgctgg
ctgcagggcgaagcgccgcagcttaagtcgccgccagcccccaacgagacgctggccgaa
cgccatcagcagatcatcgcccgcattgactcgctcaagcagcagtggcgcgagcaggtg
ggcgagatcgaaagcgtgctggaaaattccggccttgaccggcggaagtttaatcgcggc
aaccagggcaagtggatggagagagtgaacgcctgggcgcaggaagagacgttgagctac
cagttgcccgacgcgctggagaaatttgcccagtcgtttctgctcgagcgcaccaaagcc
ggtggcgaaccgccagtgcatcccctgtttagcgccgtagagtcgctgctggcctcctcg
ctgacgctcaccgatctggtactggcgagagcgatggtcgagatccgcgatgcagtcgcg
cgcgaaaagcgccgccgcggcgagctggggtttgacgatatgctcagccggcttgacgag
gcgctgcgcggcgacagcggcgaggcgctggccagcgccattcgccagcgttttccggtg
gcgatgatcgatgaatttcaggacaccgacccccagcagtaccggatttttcgccgcatc
tggcgccagcagccggagacggcgctgctgctgatcggcgatccgaagcaggccatctac
gcctttcgcggcgccgatatctttacctatatgaaagcgcgcggcgacgttgccgcgcac
tacacccttgataccaactggcgctcatcgccgggcatggtgggcagcgtcaatcggctg
ttcagcctcagcgataaccccttcatgttccgcgagatcccgtttctgccggtgaaggcg
gcggcaaagaatcagggcctgcgctttaccgtggatgcggcggacgtaccggcgatgaac
gtctggctgatgcccggcgacaccgtcgggtctggcgattatcagacctttatggcgcag
ctctgcgccacgcagatccgcgactggctgagcgccggtcagcaggggcgcgcgctgctg
tggcgcggggaaacctcgcgcccggtgcaggcttcagatattaccgtgctggtgcgcaac
cggctggaggcggcgcaggtgcgtgaagcgctgcagacgctgggcatcccctcggtctac
ctctccaaccgcgacagcgtttttgagacgctggaggcccaggagctgctctggctgctg
caggcggtgctggccccggagcgggaaaataccctgcgcagcgcgctggcgacctccatg
tttggcctgaccgcgctggatattgaaaatctgaaccaggacgagcaggcgtgggacgcg
ctggtagaggagttcagcgaataccgccagatctggcggcagctcggggtgatgccgatg
ctgcgggcgttgatgacggcccggcatatcgccgagaatctgctggcgacgcgcggcggc
gagcggcgcttaaccgacattctgcatattagcgaattgctgcaggaggcggccagccag
ctggaaagcgagcatgccctggtgcgctggctggcgcagcatatcgccgagccggacagc
aacgccgcaagccagcagatgcgtctcgaaagcgataagcacctggtgcaaattgtcacc
attcacaagtcaaaagggctggaataccccctggtctggctgccgtttatcgcccggttt
cgtaaacaggaccaggcgttttaccacgatcgcgagacgttcgcggcggtgctggatttg
ggccaggatgaggccagcctcgagctggcggaggcggaacgactggcggaagatctgcgc
ctgctgtacgtcgccctgacccgcgcggtctggcactgcagcctcggcgtggcgccgctc
agtagccggaaatccggcaacagcgatttccacctcagcgcgctggggcggctgttacag
gcgggcgaagccatggacgccgccgggctgaccgcgcagctggcagacttctgtcatggc
gatattgcattacagagaccgggcgagctggatctcaccccgtggcaggcgcccgcggcg
accatccccccgctgtcggcgcgtgagctacagcgccgtatcgccgacgactggcgggtg
accagctactccgggctgcagcagcatggtttcagcggcgggcaggatctgctgccgcgt
ctggatgtcgatgccgccggcgtcggtgaagtggtggaagagccgcagttgactccgcac
cagttcccgcgcggcgccgcgccggggaccttcctgcacagcttgtttgaggagctggac
ttcacccagccggtgccggacggatggatggcggagaagctgcagctgagcgggtttgac
gcgcagtgggcgccggtgctgaccgactggctgggcggcgtgctgaagacccgcctgccg
gggccggatatcgcgctcaatcagcttgcggcgcgggataaacaggtggagatggcgttt
tacctgcccatcgcccagctgctgacggcggagcgccttgacgcgcttatccgccagtac
gatcccctttccgccgacacgccgccgctggatttccgccaggtgcgcggcatgctgaag
ggctttatcgatctggtcttccgccacgaaggccgctattacctgctggattacaaatcc
aactggctgggggaagatcgcgaggcctatacccggccggcgatggagcaggcgatgcgt
gcccaccgctacgatctacagtatcagctgtatagcctggcgctgcaccgctatctgcgc
caccggctggccgattatgactatgaccgccacttcggcggcgtgatttatcttttcctg
cgcggcatggacgggcaggagggggggcaggggatcttcaccacccggccggtgagaccg
ctgattgacggtctggatcagctttttgccggagaaactcaggaggaggcctcatga
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