Klebsiella africana: LGL98_17130
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Entry
LGL98_17130 CDS
T07696
Symbol
rhlE
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
kar
Klebsiella africana
Pathway
kar03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
kar00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LGL98_17130 (rhlE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kar03019
]
LGL98_17130 (rhlE)
Enzymes [BR:
kar01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
LGL98_17130 (rhlE)
Messenger RNA biogenesis [BR:
kar03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
LGL98_17130 (rhlE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
HI1480
DUF6482
P-loop_SecA
Motif
Other DBs
NCBI-ProteinID:
UDD38941
LinkDB
All DBs
Position
complement(3539600..3540955)
Genome browser
AA seq
451 aa
AA seq
DB search
MSFDSLGLNPDILRAVAEQGYVEPTPIQQQAIPAVLQGRDLMASAQTGTGKTAGFTLPLL
QRLIQNEPHAKGRRPVRALILTPTRELAAQVGENVRDYSKYLNIRSLVVFGGVSINPQMM
KLRGGVDILVATPGRLLDLEHQNAVSLDKVEILVLDEADRMLDMGFIHDIRRVLAKLPAR
RQNLLFSATFSDEIKGLAEKLLHNPLEVEVARRNTASEQITQHVHFVDKNRKRELLSQLI
GEGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGGIRVLV
ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDEHKLLRDI
ERLLKKEIPRIAIAGYEPDPSIKAEPIQNGRQQRGGGRGQGQGRGGQSQGRSGQPRSQSS
APRRQDGEAPKARTQDGKPPRRRRPRKPAGE
NT seq
1356 nt
NT seq
+upstream
nt +downstream
nt
atgtcttttgattcccttggcctgaatcccgatatcctgcgcgctgtcgctgagcagggc
tacgttgagccgacccctatccagcagcaggcgatcccggcggtactgcagggccgcgat
ctgatggccagcgcccagaccggcaccggaaaaacggcgggctttaccctgccgctgctg
cagcgcctgatccagaatgagccgcatgcaaaggggcgtcgtccggtacgcgcgctgatc
ctgaccccgacccgtgagctggcggcgcaggtgggcgagaacgtccgcgattacagtaaa
tacctgaatattcgctcgctggtggtcttcggcggcgtgagcatcaacccgcagatgatg
aaactgcgcggcggtgtcgacatcctcgtcgccaccccgggtcgtctgctggacctcgaa
catcagaatgccgtcagtcttgataaagttgaaatcctcgtgctggacgaagcggaccgc
atgctggatatgggctttatccatgacatccgtcgcgtactggccaaactgccggcgcgt
cgacagaacctgctgttctcggcgaccttctccgacgagatcaagggtctggccgagaaa
ctgctgcacaacccgctggaagtggaagtggcacgtcgtaacaccgcctccgagcagatc
acccagcacgtccatttcgttgataagaaccgcaagcgcgaactgctgtcgcagcttatc
ggcgaaggcaactggcagcaggtgctggtgtttacccgtaccaagcatggcgccaaccac
ctcgcggaacagctgaacaaagacggcatccgcagcgcggcaatccatggcaacaagagc
cagggagcgcgtactcgcgccctggccgactttaaatccggcggcattcgcgtgctggtg
gcgaccgatatcgccgcccgcggtctggatatcgaagagctgccgcacgtggtgaactac
gagctgccgaacgtgccggaagattatgtccaccgcattgggcgtaccggtcgcgcggcg
gccaccggcgaagccttgtcgctggtctgcgtggatgagcataagctgctgcgcgatatc
gagcgcctgctgaaaaaagagatcccacgcatcgcaattgccggctatgagccggatccg
tccattaaagccgaacctatccagaacggtcgccagcagcgcggcggcggtcgtggtcag
ggtcagggacgcggcggccagagtcagggacgcagcggacagccgcgcagccagagcagc
gccccgcgtcgtcaggacggcgaggcaccgaaagcgcgcactcaggacggcaaaccgccg
cgccgccgtcgcccgcgtaaaccggctggcgaataa
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