Klebsiella africana: LGL98_20430
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Entry
LGL98_20430 CDS
T07696
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
kar
Klebsiella africana
Pathway
kar03030
DNA replication
kar03430
Mismatch repair
kar03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
kar00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LGL98_20430 (dnaE)
03430 Mismatch repair
LGL98_20430 (dnaE)
03440 Homologous recombination
LGL98_20430 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
kar03032
]
LGL98_20430 (dnaE)
03400 DNA repair and recombination proteins [BR:
kar03400
]
LGL98_20430 (dnaE)
Enzymes [BR:
kar01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LGL98_20430 (dnaE)
DNA replication proteins [BR:
kar03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LGL98_20430 (dnaE)
DNA repair and recombination proteins [BR:
kar03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LGL98_20430 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
DNA_pol_IIIA_C
HHH_6
tRNA_anti-codon
Motif
Other DBs
NCBI-ProteinID:
UDD39532
LinkDB
All DBs
Position
complement(4222633..4226115)
Genome browser
AA seq
1160 aa
AA seq
DB search
MAEPRFVHLRVHSDYSMIDGLAKTGPLVKKAASLGMPALAITDFTNLCGLVKFYGTGHGA
GIKPIVGADFHVQCDLLGDEFTELTVLAANNTGYQNLTLLISRAYQRGYGALGPWIDRDW
LVEHQEGLILLSGGRKGDVGVSLIRGNMPLVEQCVAFYEEHFPDRYFLELIRTGRQDEES
YLHAAVALAEARGLPVVATNDVRFLETGDFDAHEIRVAIHDGFTLDDPKRPRNYSPQQYM
RSEEEMCELFADIPEALANSVEIAKRCNVTVRLGEYFLPQFPTGDMTTEDFLVMKSKEGL
EERLAFLFPDPEVRAQRRPEYDERLDIELQVINQMGFPGYFLIVMEFIQWSKDNGVPVGP
GRGSGAGSLVAYALKITDLDPLEFDLLFERFLNPERVSMPDFDVDFCMEKRDQVIEHVAD
MYGRDAVSQIITFGTMAAKAVIRDVGRVLGHPYGFVDRISKLVPPDPGMTLAKAFEAEPQ
LPEIYEADEEVKALIDMARKLEGVTRNAGKHAGGVVIAPTKITDFAPLYCDEQGLHPVTQ
FDKNDVEYAGLVKFDFLGLRTLTIINWALEMINKRREKNGEGPLDIAAIPLDDKKSFDML
QRSETTAVFQLESRGMKDLIKRLQPDCFEDMIALVALFRPGPLQSGMVDNFIDRKHGREE
ISYPDVQWQHESLKPVLEPTYGIILYQEQVMQIAQVLSGYTLGGADMLRRAMGKKKPEEM
AKQRSIFEDGAKKNGVDGELAMKIFDLVEKFAGYGFNKSHSAAYALVSYQTLWLKAHYPA
EFMAAVMTADMDNTEKVVGLVDECWRMGLKILPPDINSGLYHFHVNDDGEIVYGIGAIKG
VGEGPIEAIIEARNNGGYFRELFDLCARTDIKKLNRRVLEKLIMSGAFDRLGPHRAALMN
SLGDALKAADQHAKAEAIGQADMFGVLAEEPEQIEQSYASCQPWPEQMVLDGERETLGLY
LTGHPINQYLKEIERYVGGVRLKDMHPTERGKVTTAAGLVIAARVMVTKRGNRIGICTLD
DRSGRLEVMLFTDALDKYQQLLEKDRILIVSGQVSFDDFSGGLKMTAREVMDIDEAREKY
ARGLAISLTDRQIDDQLLNRLRQSLEPHRSGTIPVHLYYQRADARARLRFGATWRVSPSD
RLLNDLRGLIGSEQVELEFD
NT seq
3483 nt
NT seq
+upstream
nt +downstream
nt
atggctgaaccacgtttcgtacacctgcgggtgcacagcgactattccatgatcgatggg
ctggcaaagaccgggccgctggtgaagaaggcggcctcgcttggcatgccagcgctggcg
atcactgatttcactaacctgtgtgggctggtgaagttctacgggacgggacacggcgcg
ggcattaagccgatcgtcggcgccgacttccacgtgcagtgcgacctgctcggtgacgaa
tttaccgagctgacggtgctggcggcgaacaacaccggctaccagaacctgactctgctg
atttcccgtgcctatcagcgcggctatggcgcgcttggcccatggatcgaccgcgactgg
ctggtggaacatcaggaagggctaattctgctttccggcggccggaaaggcgacgtcggc
gtcagcctgatccgcggcaatatgccgctggttgaacagtgcgtcgctttctatgaagag
catttcccggaccgctattttctggagctgatccgtaccggtcgtcaggatgaagagagc
tatcttcatgccgccgtggcgctggcggaagcgcgcggcctgccggtggtggcgaccaac
gatgtccgcttccttgaaaccggcgacttcgacgcccacgaaatccgcgtagccattcac
gacggcttcaccctcgacgatccaaaacggccgcgcaattactcgccgcagcaatatatg
cgcagtgaggaggagatgtgcgagctgttcgccgacatcccggaagcgctggcgaacagc
gttgaaattgccaagcgctgcaacgtcaccgtgcggcttggcgaatatttcctgccgcag
ttcccgaccggcgatatgaccaccgaagatttcctggtcatgaaatcgaaagagggtctg
gaagagcgtctggcgtttctgttcccggatccggaagtgcgcgcgcagcgtcgcccggag
tacgacgaacgtctggatatcgagctccaggttatcaaccagatggggttcccgggctac
ttcctgatcgtgatggagtttatccagtggtcgaaggataacggcgtgccggttggcccg
ggacgcggttccggcgccggttcgctggtggcctacgcgctgaagatcaccgatcttgac
ccgctggagttcgacctgctgttcgaacgtttccttaacccggagcgtgtctcgatgccc
gacttcgacgtcgacttctgcatggagaaacgcgaccaggttatcgagcatgtggcggat
atgtacggccgcgacgcggtatcgcagatcattacctttggtaccatggcggcgaaggcg
gttatccgcgacgtggggcgtgtgctgggtcacccgtacggcttcgtcgaccgtatttcc
aagctggtgccgcccgatccgggcatgacgctggcgaaagcctttgaggccgaaccgcag
ctgccggaaatctacgaagcggacgaagaagttaaagcgctgatcgacatggcgcgtaag
ctggaaggggtaacgcgaaacgccggtaaacacgctggtggggtggttattgctccgact
aaaatcactgacttcgcgccgctgtattgcgatgagcaggggctgcatccggtcacccag
tttgacaaaaacgacgtggaatacgccgggctggtgaaattcgacttcctcggtctgcgt
acgctcactatcattaactgggcgctggagatgattaacaagcgccgtgagaagaacggc
gaagggccgttggatatcgccgctatcccgttggatgacaagaaaagcttcgacatgctg
cagcgctcggaaaccaccgcggtgttccagcttgaatcgcgcggcatgaaagatctgatt
aagcgtctgcagcctgactgcttcgaagatatgatcgcgctggtggccctgttccgcccg
ggtccgctgcagtcggggatggtagataactttatcgaccgtaagcacggtcgtgaagag
atctcttatccggacgtgcagtggcagcatgaaagcctgaaaccggtgctggagccgacc
tacggcatcatcctgtatcaggaacaagtcatgcagatcgcccaggtgctgtccggatat
accctcggcggcgcggatatgctgcgtcgtgcaatgggtaagaaaaagccggaggagatg
gccaagcagcgttctatctttgaagatggggcgaagaaaaacggcgttgacggcgaactg
gcgatgaaaatcttcgacctggtggagaaattcgccgggtacggatttaacaaatcgcac
tccgccgcctacgcgctggtctcctaccagacgctgtggctcaaggcgcactatccggcc
gagtttatggcggcggtgatgaccgccgatatggataacaccgagaaggtagtgggcctg
gtggatgaatgctggcgcatggggctgaaaattttgcccccggatattaactccggcctg
taccatttccacgtcaacgacgatggcgagatcgtctacggtatcggtgccatcaagggc
gtcggcgaagggccgatcgaagcgattattgaggcgcgcaacaatggcggctatttccgc
gagctgttcgacctctgcgcgcgaaccgatattaaaaagctcaaccgccgggtgctggaa
aagctgattatgtccggggcgttcgatcgactcggcccacatcgcgcggcgctgatgaat
tcgctgggcgatgcgctgaaagccgccgaccagcacgcgaaagccgaggccatcggccag
gctgatatgttcggcgtgctggcggaagagcccgagcagattgagcaatcctacgccagc
tgccagccatggcctgagcagatggtgctggatggtgaaagggagaccctggggctatac
ctcaccggacacccgattaaccagtatctgaaagagattgagcgctacgtcggcggcgtg
cggctcaaagacatgcatccgaccgaacgtgggaaagtcaccacggcggcggggctggtg
attgcggcgcgggtaatggtcaccaagcgcggcaatcgtatcggcatctgtaccctggat
gaccgttccgggcggctggaagtgatgttattcaccgacgcgctggataaatatcagcag
ttgctggaaaaagaccgcatacttatcgtcagcggacaggtcagctttgatgactttagc
ggggggcttaaaatgaccgcccgtgaagtcatggacattgacgaagcccgggaaaaatat
gctcgcgggcttgctatctcgctgacggacaggcaaattgatgaccagcttttaaaccga
ctccgtcagtctctggaaccccaccgttcgggaaccattccagtgcacctctactatcag
agggcggatgcacgcgcgcggttgcgtttcggcgcaacatggcgcgtctctccgagcgat
cgtttacttaacgatctgcggggccttatcggctcggagcaggtggaactggagtttgac
taa
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