Kluyvera ascorbata: KATP_05280
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Entry
KATP_05280 CDS
T06881
Symbol
truB
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
kas
Kluyvera ascorbata
Brite
KEGG Orthology (KO) [BR:
kas00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
kas03016
]
KATP_05280 (truB)
Enzymes [BR:
kas01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
KATP_05280 (truB)
Transfer RNA biogenesis [BR:
kas03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
KATP_05280 (truB)
Prokaryotic type
KATP_05280 (truB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB-C_2
TruB_C_2
Motif
Other DBs
NCBI-ProteinID:
BCA38006
LinkDB
All DBs
Position
554745..555689
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AA seq
314 aa
AA seq
DB search
MSRPRRRGRDIHGVLLLDKPQGASSNDVLQKVKRIYNANRAGHTGALDPLATGMLPICLG
EATKFSQYLLDSDKRYRVIARLGQRTDTSDADGQIVEERPVTFSDAQLAEALESFRGDTQ
QVPSMYSALKYQGKKLYEYARQGIDVPREARPITVYELLFIRHEGNELELEIHCSKGTYI
RTIIDDLGEKLGCGAHVIFLRRLAVSKYPVDRMVTLEQLHALVEQAEQQGVPAAELLDPL
LMPMDSPASDYPIVNIPLTSSVYFKNGNPVRTSGAPLEGLVRVTEGEEGKFLGMGEIDDE
GRVAPRRLVVEYTE
NT seq
945 nt
NT seq
+upstream
nt +downstream
nt
atgagtcgtcctcgtcgtcgcggccgtgatattcacggcgtattgttgctggacaaaccg
caaggcgcgtccagcaatgatgtgctgcagaaggtaaagcgtatttataacgccaaccgc
gccgggcataccggcgcgctggacccgctggctaccggcatgttgccgatttgcctcggt
gaagccaccaagttttctcagtatcttctggactccgacaagcgttatcgtgtgattgcc
cgcctgggtcagcgcaccgatacctcggatgccgatggtcagatcgtggaagaacgtccg
gtgaccttcagcgatgcacagctggctgaggcgctggagagcttccgtggagacacccag
caggtgccatccatgtactcggcgctgaagtaccagggtaaaaagctttacgaatatgca
cgtcagggcatcgacgtaccgcgtgaagcccgcccgattaccgtctatgagctgctgttt
atccgccacgaaggtaacgaactggagctggagattcactgctcgaaaggcacctatatt
cgtaccattatcgacgatctgggtgaaaagctcggctgcggcgcgcacgtgattttcctg
cgtcgtctggcggtcagcaaatacccggtcgaccgtatggttacgctggagcaactgcat
gccctggtcgaacaggctgagcagcagggcgttccggcagcggaactgctcgatccgcta
ttaatgccaatggacagtccggcttcagactatccgatagtcaatattcctttaacctca
tcggtctactttaaaaatggtaacccggtgcggacgtcaggcgcgcctctggaaggtctg
gtacgcgtgacggaaggtgaagaaggcaaatttcttggcatgggtgaaatcgacgacgaa
ggccgcgtggcaccacgccgtctggtggtcgaatacaccgagtaa
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