Kluyvera ascorbata: KATP_05320
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Entry
KATP_05320 CDS
T06881
Symbol
deaD
Name
(GenBank) ATP-dependent RNA helicase DeaD
KO
K05592
ATP-dependent RNA helicase DeaD [EC:
5.6.2.7
]
Organism
kas
Kluyvera ascorbata
Pathway
kas03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
kas00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KATP_05320 (deaD)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kas03019
]
KATP_05320 (deaD)
03009 Ribosome biogenesis [BR:
kas03009
]
KATP_05320 (deaD)
Enzymes [BR:
kas01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
KATP_05320 (deaD)
Messenger RNA biogenesis [BR:
kas03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
KATP_05320 (deaD)
Ribosome biogenesis [BR:
kas03009
]
Prokaryotic type
rRNA helicases
KATP_05320 (deaD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
DbpA
DeaD_dimer
DeaD_C
ResIII
CMS1
AAA_22
DRTGG
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
BCA38010
LinkDB
All DBs
Position
559771..561741
Genome browser
AA seq
656 aa
AA seq
DB search
MYYMAEFETTFADLGLKAPILEALTDLGYEKPSPIQAECIPHLLGGRDVLGMAQTGSGKT
AAFSLPLLNNLDPELKAPQILVLAPTRELAVQVAEAMTEFSKHMRGVNVVALYGGQRYDV
QLRALRQGPQIVVGTPGRLLDHLKRGTLDLSKLSGLVLDEADEMLRMGFIEDVETIMAQI
PEGHQTALFSATMPEAIRRITRRFMKDPQEVRIQSSVTTRPDISQSYWSVYGMRKNEALV
RFLEAEDFDAAIIFVRTKNATLEVAEALERSGYNSAALNGDMNQSLREQTLDRLKDGRLD
ILIATDVAARGLDVERISLVVNYDIPMDSESYVHRIGRTGRAGRAGRALLFVENRERRLL
RNIERTMKLTIPEVELPNADLLGKRRLEKFAAKVQQQLESSDLDQYRALLAQIQPTAEGE
ELDVETLAAALLKMAQGERSLIVPPDAPMRPKREFRDRDDRFERRDRNDRGPRDRNDRGG
EDRPKRERRDVGDMELYRIEVGRDDGVEVRHIVGAIANEGDISSRYIGNIKLFGTHSTIE
LPKGMPGEVLQHFTRTRILNKPMNMQLIGDAQPRPERSGRSFGGERREGGRSFGGERREG
GRGFGGERREGGRGDGRRFSGERRDGGNRAPRRDDAGTSAPRRDDSTGRRRFGGDA
NT seq
1971 nt
NT seq
+upstream
nt +downstream
nt
ttgtactacatggctgaattcgaaaccacttttgcagatctgggcctgaaggctcctatc
cttgaagcccttaccgatctgggttacgaaaaaccatctccgatccaggctgagtgcatt
ccgcacctgctgggcggtcgtgacgttctgggtatggcccagacaggtagtggtaaaacc
gcagcgttttccctgccactgctgaacaatcttgatcctgagctgaaagcaccacagatt
ctggtgttggcaccgacccgcgaactggcggttcaggtagctgaagccatgactgagttc
tctaaacatatgcgcggcgtaaacgtggttgccctgtacggcggccagcgttatgacgtg
cagttacgtgccctgcgtcaagggccacagattgtcgtcggtaccccaggtcgtctgctt
gaccacctgaagcgcggtactctggatctctctaaactgagcggtctggtactggacgaa
gctgatgaaatgctgcgtatgggctttatcgaagacgttgaaaccatcatggctcagatt
ccagaaggtcatcagaccgctctgttctctgcaaccatgccggaagctatccgtcgtatt
acccgtcgctttatgaaagatccacaggaagtacgcattcagtccagcgtaacgacccgt
cctgacatcagccagagctactggtctgtgtacggcatgcgcaaaaatgaagcgctggta
cgtttcctggaagctgaagattttgatgcggcgattatcttcgttcgtaccaaaaacgcg
accctggaagtggctgaagccctggaacgtagcggctacaacagcgctgcgctgaacggt
gacatgaaccagtccctgcgtgagcagactctggatcgtctgaaagacggtcgtctggat
atcctgatcgcaaccgacgttgcggcacgtggtctggacgttgagcgtatcagcctggtc
gttaactacgacatcccgatggactccgagtcttacgttcaccgtatcggtcgtaccggt
cgtgcgggtcgtgctggccgtgcgctgctgttcgtcgagaaccgcgagcgtcgtctgctg
cgcaacatcgaacgtactatgaagctgaccattccagaagttgagctgccaaacgcagat
ctgctgggcaaacgccgcctggaaaaattcgccgcgaaagtacagcagcagctggaaagc
agcgatctggatcagtaccgtgcactgctggcgcaaatccagccgaccgcggaaggcgaa
gagctggacgttgaaacgctggccgctgcgttgttgaaaatggcacagggcgaacgttct
ctgatcgttccaccagatgcgccaatgcgtcctaagcgtgagttccgtgaccgtgacgat
cgtttcgaacgtcgtgaccgtaacgaccgtggtccacgcgatcgtaatgaccgtggtggc
gaagatcgtcctaaacgcgaacgtcgtgacgttggcgatatggaactgtaccgcattgaa
gtgggccgtgatgacggcgttgaagttcgtcacatcgttggcgctatcgcgaacgaaggc
gacatcagcagccgttacatcggtaacatcaagctgttcggtacccactctactatcgaa
ctgccaaaaggcatgccgggcgaagtactgcagcactttactcgtacccgcatcctcaac
aaaccgatgaacatgcagctgatcggcgacgcgcagcctcgtccagagcgtagcggtcgt
agcttcggcggcgaacgccgtgaaggcggtcgtagcttcggtggcgaacgtcgcgaaggc
ggtcgtggtttcggtggtgagcgtcgtgaaggcggccgtggtgatggtcgtcgtttcagc
ggtgaacgtcgtgacggtggtaaccgtgcgccgcgccgtgatgatgctggcacttctgct
ccacgtcgtgatgactctaccggtcgtcgtcgtttcggcggtgacgcataa
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