Kluyvera ascorbata: KATP_20740
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Entry
KATP_20740 CDS
T06881
Symbol
ydcS
Name
(GenBank) spermidine/putrescine ABC transporter substrate-binding protein
KO
K02055
putative spermidine/putrescine transport system substrate-binding protein
Organism
kas
Kluyvera ascorbata
Pathway
kas02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
kas00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
KATP_20740 (ydcS)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
kas02000
]
KATP_20740 (ydcS)
Transporters [BR:
kas02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
KATP_20740 (ydcS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_8
SBP_bac_1
SBP_bac_6
Phosphonate-bd
Glyco_hydro_62
Ral
DUF4623
Motif
Other DBs
NCBI-ProteinID:
BCA39552
LinkDB
All DBs
Position
2236856..2238001
Genome browser
AA seq
381 aa
AA seq
DB search
MSKKFARSSLCALVMTVATANAAEPPTSLGKAEGRLDIIAWPGYIERGQTDKQYDWVTQF
EKETGCQVNVKTAATSDEMVSLMAKGGYDLVTASGDASLRLIMGKRVQPINTALIENWKS
LDPRLEKGAWFNVDGKVYGTPYQWGPNLLMYNTKTFPTPPDSWNVVFVKQNLPDGKTNQG
RVQAYDGPIYIADAALFVKATQPQLGISDPYQLTEAQYQAVLKVLRDQHELIHRYWHDTT
VQMSDFKNEGVVASSAWPYQANGLKGEGQPIATVFPKEGVTGWADTTMLHAEAKHPVCAY
KWMNWSLTPKVQGDVAAWFGSLPVVAEGCKASTLLGDKGCETNGYSFFDKIAFWKTPIAE
GGKYVPYSRWTQDYIAIMGGR
NT seq
1146 nt
NT seq
+upstream
nt +downstream
nt
atgagcaagaaatttgcccgcagcagcctgtgcgcgctggtgatgaccgtcgctaccgcg
aatgccgccgaacccccaacgtcgcttggaaaagcagaagggcgcctggatattatcgcc
tggccggggtatatcgagcggggtcaaaccgataaacaatatgattgggtgacccagttt
gaaaaagagaccggctgtcaggttaacgttaaaacggcggcaacctctgacgaaatggtc
agtctgatggcgaaaggaggttatgacctggtgacggcctccggcgatgcctcgctgcgt
ttgatcatgggtaaacgcgtgcagccgattaacacggcgctgattgaaaactggaaatcc
ctcgacccgcgcctggaaaagggtgcctggtttaacgttgacggtaaagtttatggcacg
ccctatcagtgggggccaaacctgctgatgtacaacaccaaaaccttcccgacgccacca
gactcctggaacgtcgtcttcgttaaacaaaatctgccggatggtaaaaccaatcagggg
cgcgtgcaggcctacgatggccctatctacattgccgatgctgcgctatttgtcaaagct
acgcagccgcagctgggtatcagcgacccgtaccagcttaccgaagcacaatatcaggcg
gtattgaaggtgctgcgcgaccagcatgaattgattcaccgctactggcacgataccacc
gtgcagatgagcgactttaaaaacgaaggcgtggtggcctccagcgcctggccgtatcag
gctaacggccttaaaggcgaaggtcagccgattgctaccgtgttcccgaaagaaggggtg
accggttgggcggataccaccatgctgcacgctgaagcaaaacatccggtctgcgcctac
aagtggatgaactggtcgttaacgccaaaagtgcagggcgacgtcgcggcctggtttggc
tcgctgccggtggtcgctgaaggctgtaaggccagtaccttactgggcgataaaggctgt
gaaaccaacggctacagcttcttcgacaaaattgccttctggaaaacgccgatcgctgaa
ggcggcaaatacgtgccttatagccgctggacgcaggactatatcgccattatgggcggc
cgctaa
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