Kluyvera ascorbata: KATP_31120
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Entry
KATP_31120 CDS
T06881
Symbol
rhlE
Name
(GenBank) ATP-dependent RNA helicase RhlE
KO
K11927
ATP-dependent RNA helicase RhlE [EC:
5.6.2.7
]
Organism
kas
Kluyvera ascorbata
Pathway
kas03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
kas00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KATP_31120 (rhlE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kas03019
]
KATP_31120 (rhlE)
Enzymes [BR:
kas01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
KATP_31120 (rhlE)
Messenger RNA biogenesis [BR:
kas03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
KATP_31120 (rhlE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
AAA_19
HI1480
UvrD-helicase
P-loop_SecA
Utp25_C
AAA_22
Motif
Other DBs
NCBI-ProteinID:
BCA40590
LinkDB
All DBs
Position
complement(3309473..3310849)
Genome browser
AA seq
458 aa
AA seq
DB search
MSFDSLGLNPDILRAVAEQGYQEPTPIQQQAIPAVLQGRDLMASAQTGTGKTAGFTLPLL
QLLVSREPHVKGRRPVRALILTPTRELAAQIGENVREYSRYLNIRSLVVFGGVSINPQMM
KLRGGVDVLVATPGRLLDLEHQNAVKLDQIEILVLDEADRMLDMGFIHDIRRVLTKLPAK
RQNLLFSATFSDDIKSLAEKLLTNPLEIEVARRNTASEQVTQHVHMVDKKRKRELLSQMI
GQGNWQQVLVFTRTKHGANHLAEQLNKDGIRSAAIHGNKSQGARTRALADFKSGDIRVLV
ATDIAARGLDIEELPHVVNYELPNVPEDYVHRIGRTGRAAATGEALSLVCVDELKLLRDI
ERLLKKEIPRIALDGYDVDPSIKAEPIQNGRQQRGGGNGGGRGRGQSQGQGQGPGRSQQQ
PRRNDGGAPKAKPRSAEGKPAGDKPRPPRRPRKPAAAQ
NT seq
1377 nt
NT seq
+upstream
nt +downstream
nt
atgtcttttgattccctcggactgaaccccgatattctgcgtgccgttgccgagcagggc
taccaggaacccactcctattcagcagcaggcgattcctgctgtactgcagggccgtgac
ctgatggccagcgcgcagaccggtaccggtaaaaccgcaggctttacgctgccgctgctg
caactgctggtgtctcgcgagccgcacgttaaaggtcgtcgccccgtacgcgcgctgatc
ctcacgccaacccgtgagctggccgcccagattggcgaaaacgtccgtgaatacagccgc
tacctgaatatccgttcgctggtggttttcggcggcgtgagcattaacccgcagatgatg
aaactgcgcggcggcgttgacgtactggtggcaacgccgggccgtctgctggacctcgaa
catcagaacgccgtgaagctcgatcagattgaaatcctggtgctggatgaagcggaccgc
atgctggatatgggctttatccacgacatccgccgcgtgctgaccaaactgccggccaag
cgccagaacctgctgttctcggcgactttctctgatgacatcaaatcgctggcagaaaaa
ctgctgaccaacccgctggaaatcgaagtggcgcgtcgcaacaccgcttccgagcaggtg
acgcagcacgtgcatatggtggataaaaagcgtaagcgtgagctgttgtcgcagatgatt
ggtcagggtaactggcagcaggtgctggtcttcacccgtactaagcacggcgcaaaccat
ctggcagaacagttgaataaagacggtatccgcagcgctgcgattcacggcaacaaatcg
cagggtgcgcgtacgcgtgcgctggctgattttaaatctggtgatattcgcgtgctggtg
gcaaccgacatcgccgcgcgtggcctggatatcgaagagctgccgcacgtggtgaactac
gagctgcctaacgtcccggaagattacgttcaccgtatcggtcgtaccggccgtgcagcg
gccaccggtgaagcgctgtctttggtgtgtgttgatgaactcaaactgcttcgcgacatc
gaacgtctgctgaagaaagagatcccacgtatcgccctcgacggctatgacgtcgatccg
tcaatcaaagccgagccgattcagaacggtcgccagcagcgtggcggcggcaacggcggt
ggccgtggtcgcggtcagagccagggtcaagggcagggcccgggtcgtagccagcagcag
ccgcgtcgtaacgacggcggggcaccgaaggccaaaccgcgcagcgcggaaggtaaaccg
gctggcgataagccacgaccgccgcgccgcccgcgtaaacccgcagcagcacagtaa
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