Kluyvera ascorbata: KATP_43280
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Entry
KATP_43280 CDS
T06881
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
kas
Kluyvera ascorbata
Pathway
kas03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
kas00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
KATP_43280 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kas03019
]
KATP_43280 (recQ)
03400 DNA repair and recombination proteins [BR:
kas03400
]
KATP_43280 (recQ)
Enzymes [BR:
kas01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
KATP_43280 (recQ)
Messenger RNA biogenesis [BR:
kas03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
KATP_43280 (recQ)
DNA repair and recombination proteins [BR:
kas03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
KATP_43280 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RQC
DEAD
Helicase_C
HRDC
RecQ_Zn_bind
ResIII
Cas3-like_C_2
zf-CXXC
Motif
Other DBs
NCBI-ProteinID:
BCA41806
LinkDB
All DBs
Position
complement(4652049..4653878)
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AA seq
609 aa
AA seq
DB search
MAQAEVLNQESLAKQVLQETFGYQQFRPGQETIIDTVLEGRDCLVVMPTGGGKSLCYQIP
ALVLNGLTVVVSPLISLMKDQVDQLLANGVAAACINSTQTREQQQEVMAGCRTGQIRLLY
IAPERLMLDNFLEHLAHWNPAMLAVDEAHCISQWGHDFRPEYAALGQLRQRFPSLPFMAL
TATADDTTRSDIVRLLGLNDPFIQISSFDRPNIRYMLMEKFKPIDQLMRYVQEQRGKSGI
IYCNSRAKVEDTAARLQSRGISAGAYHAGLENNVRADVQEKFQRDDLQIVVATVAFGMGI
NKPNVRFVVHFDIPRNIESYYQETGRAGRDGLPAEAMLFYDPADMAWLRRCLEEKPEGML
QDIERHKLNAMGAFAEAQTCRRLVLLNYFGEGRQEPCGNCDICLDPPKQYDGVQDAQIAL
STIGRVNQRFGMGYVVEVIRGANSQRIREFGHDKLKVYGMGRDKSHEHWVSVIRQLIHLG
FVTQNIAQHSALQLTDASRPVLRGEALLQLAVPRIVALKPRVMQKAAVGNYDKQLFAKLR
KLRKAIADEENIPPYVVFNDATLIEMAEQMPISPSDMLSVNGVGTRKLERFGREFLALIR
AHVDGDDEE
NT seq
1830 nt
NT seq
+upstream
nt +downstream
nt
gtggcacaggcggaagttttaaatcaggaatcgctggctaaacaggttttgcaagagacc
tttggctaccagcagttccgtcctggccaggaaaccattatcgacaccgtgctggaaggg
cgcgactgcctggtcgtgatgccaaccggcggcggcaaatcgctgtgctatcaaattcct
gcgctggtgcttaacggcctgacagtggtggtttcaccgctgatctcgctgatgaaggac
caggtcgatcagctgctggcgaacggcgtggcggcggcttgtatcaactccactcaaacc
cgtgaacagcagcaagaggtgatggccggctgccgcaccgggcagattcgcctgctgtac
atcgccccggaacgcctgatgctggataacttccttgagcatctggcacactggaatccg
gcgatgctggcggtcgatgaagcacactgtatctcgcagtggggacatgatttccgcccg
gaatatgccgccctgggtcaactgcgtcagcgcttcccatcgctgccgtttatggcgctg
acggctaccgccgacgacaccacgcgtagcgatattgtccgtttgctggggctgaacgat
ccgtttatccaaatcagcagctttgaccgcccgaatattcgctacatgctgatggagaag
tttaagcccatcgaccagttgatgcgctacgtgcaggagcagcgcggtaaatccggcatt
atttactgtaatagccgtgcgaaggtggaagacaccgcagcccgtttgcagagccgtggc
atcagcgcgggggcttatcacgccgggcttgaaaacaacgtgcgcgccgacgtgcaggag
aaattccagcgcgacgacctgcaaattgtcgtcgctaccgtggctttcgggatgggtatc
aacaagcccaacgttcgtttcgtggtgcacttcgacattccgcgcaatatcgaatcctac
tatcaggagaccggtcgtgctggccgagacggcctgccggcggaagcgatgctgttttac
gacccggcagatatggcgtggctgcgccgctgtctggaagaaaagccagagggcatgttg
caggatattgaacggcataagctcaacgcgatgggggcgtttgctgaagcgcagacctgc
cgtcgcctggtgctgctcaactatttcggcgaaggtcgccaggagccgtgcggtaactgc
gatatctgcctcgacccgcctaaacagtacgacggcgtgcaggatgcgcagattgcgctc
tcaaccattggccgggttaaccagcgctttgggatgggctatgtcgttgaggtgattcgc
ggtgcgaacagccagcgtattcgcgagttcggacacgataaactgaaagtctatggaatg
gggcgagacaaaagtcatgagcattgggtgagcgtcattcgccagcttatccacttaggt
tttgtcacccagaatattgcccagcattcggcgctacagcttaccgacgcatcccgcccg
gtgctgcgcggcgaagcgctgttgcagcttgccgtaccgcgtatcgtggcgctgaagccg
cgcgtgatgcagaaagcggcagtaggcaattacgacaagcagctgtttgccaagctgcgc
aagttgcgtaaagccattgccgatgaagaaaatatcccgccttatgtggtcttcaacgac
gcgacgctgattgaaatggcagaacagatgcctatctctccgagcgatatgctcagcgtc
aacggcgtcggcacgcgtaagctcgagcgttttggccgtgagtttctggcgcttatccgc
gctcacgtcgacggcgacgatgaggagtag
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