Kitasatospora aureofaciens: B6264_05290
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Entry
B6264_05290 CDS
T05021
Name
(GenBank) helicase
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
kau
Kitasatospora aureofaciens
Pathway
kau03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
kau00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
B6264_05290
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kau03400
]
B6264_05290
Enzymes [BR:
kau01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
B6264_05290
DNA repair and recombination proteins [BR:
kau03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
B6264_05290
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_19
HHH_4
AAA_30
UvrD_C_2
SH3_13
Viral_helicase1
HHH_5
AAA_11
AAA_22
Helicase_RecD
PhoH
nSTAND3
SH3_18
PIF1
UvrD-helicase
DAP3
HTH_IclR
AAA_10
UvrD_C
DUF87
DEAD
AAA_16
AAA
P-loop_TraG
Motif
Other DBs
NCBI-ProteinID:
ARF78413
LinkDB
All DBs
Position
complement(1224394..1226628)
Genome browser
AA seq
744 aa
AA seq
DB search
MGKQAQSGQQVPHQLAQVEGVLERITYANEETGYTVARVDTGRGGNDLLTVVGALLGAQV
GESLRLHGRWGSHPQYGRQFTVENYTTVLPATVQGIQRYLGSGLIKGIGPRFAERIVERF
GVDTLEVIENEPGRLIEVPGLGPKRTRKIAEAWDEQKAIKEVMVFLQGVGVSTSLAVRIY
KQYGDASIGVVKNEPYKLASDVWGIGFLTADRIAQAVGIPHDSPERVKAGLQYALSQSSD
QGHCYLPEERLIADGVKLLQVDVGLVIDCLAELVAAEGVVRETVPGEAGEPITAIYLVPF
HRAEISLANQLLRLLRSDSDRLPWSAEVDWPVALDWLAKRTGTELAPEQQQSVRLALTRK
VAVLTGGPGCGKSFTVKSIVMMALAKRAKVVLAAPTGRAAKRLAELTGAEASTVHRLLEL
KPGGDAAYDRDRPLDADLVVVDEASMLDLILANKLVKAVPPGAHLLFVGDVDQLPSVGAG
EVLQDLLAEGGPIPSVRLTRIFRQAQQSGVVVNAHRINEGKPPLTEGLADFFLFAEEDTE
RAAGLTVDVVARRIPQKFGFDPRRDVQVLAPMHRGPAGAGNLNTLLQGAVTPAREGLAER
RFGGRTFRVGDKVTQIRNNYDKGRNGVFNGTVGVVTALSVDDQRLTVLTDEDEEVSYDFD
ELDELSHAYAVTIHRSQGSEYPVVVIPVTMSAWTMLQRNLLYTAVTRARKLVVLVGSRKA
IAQAVRAVSAGRRHAALDHRLASG
NT seq
2235 nt
NT seq
+upstream
nt +downstream
nt
gtgggcaagcaggcgcagtcggggcagcaggtcccgcaccaactcgcgcaggtcgagggc
gtgctggagcggatcacctatgccaacgaggagaccggttacacggtggcgcgggtggac
accggccggggcgggaacgacctgctgacggtggtgggcgcgctgctgggggcgcaggtc
ggcgagtcgctgcggctgcacgggcggtggggttcgcacccgcagtacgggcggcagttc
acggtggagaactacacgacggtgctgccggccacggtgcagggcatccagcggtacctg
ggctcggggctgatcaaggggatcgggccgcggttcgccgagcggatcgtggagcgcttc
ggggtggacaccctggaggtgatcgagaacgagccgggtcggctgatcgaggtgccgggg
ctgggaccgaagcgcaccaggaagatcgccgaggcctgggacgagcagaaggccatcaag
gaggtgatggtcttcctccagggggtcggggtgtcgacctccttggcggtccggatctac
aagcagtacggggacgcctcgatcggggtggtgaagaacgagccgtacaagctggcttcg
gacgtctggggcatcggcttcctgacggcggaccggatcgcgcaggcggtgggcatcccg
cacgacagcccggagcgggtgaaggccgggctgcagtacgcgctgtcgcagagcagcgac
caggggcactgctacctgccggaggagcggctgatcgcggacggcgtgaagctgttgcag
gtggacgtggggctggtgatcgactgcctggcggagctggtcgcggccgagggggtggtg
cgcgagacggtgccgggggaggcgggcgagccgatcaccgcgatctacctggtgccgttc
caccgggcggagatctcgctggccaaccagctgctgcgactgctccgttcggactccgac
cgcctgccgtggtccgccgaggtggactggccggtggcgctggactggctggcgaagcgg
acggggacggagctggcgccggagcagcagcagtcggtgcggctggcgctgacccgcaag
gtcgcggtgctgacgggtggtccgggctgcggcaagtcgttcacggtgaagtcgatcgtg
atgatggcgctggccaaacgggcgaaggtggtgctggcggcgccgaccggccgggcggcg
aagcggctggcggagctgaccggggcggaggcctcgacggtgcaccggttgctggagctg
aagccgggcggggacgccgcctacgaccgggaccggccgctggacgcggacctggtggtg
gtggacgaggcgtcgatgctggacctgatcctggcgaacaagctggtcaaggcggtgccg
ccgggcgcccatctgctgttcgtgggggacgtggaccagctgccctcggtgggtgccggg
gaggtgctgcaggacctgctggcggagggcgggccgatcccgtcggtgcggctgacccgg
atcttccggcaggcgcagcagtccggagtggtggtcaacgcgcaccggatcaatgagggg
aagccgccgttgacggagggtctggcggacttcttcctgttcgccgaggaggacacggag
cgggcggccggtctgacggtggacgtggtggcgcgtcggatcccgcagaagttcggcttc
gatccgcgccgggacgtgcaggtgctggcgccgatgcaccgtggcccggccggggcgggg
aacctgaacacgctgttgcagggcgcggtgacgccggcccgggaggggctggcggagcgg
cggttcggcgggcggacgttccgggtgggggacaaggtcacccagatccgcaacaactac
gacaaggggcggaacggcgtcttcaacggcacagtgggagtggtgaccgccctcagcgtg
gacgaccagcggctgacggtgctcaccgacgaggacgaggaggtgtcgtacgacttcgac
gaactggacgagctgtcacacgcgtacgcggtgacgatccaccgctcgcagggcagtgag
tatccggtggtggtgattccggtcacgatgtccgcttggacgatgctccagcgaaatctg
ctctacaccgctgtgaccagggcgaggaaactcgtggtgctggtggggtcacggaaggcg
atcgcgcaggccgtgagggccgtcagtgcaggtcggcggcatgccgcgctcgatcatcga
cttgcttctggatga
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