Kitasatospora aureofaciens: B6264_10535
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Entry
B6264_10535 CDS
T05021
Name
(GenBank) ATP-dependent helicase
KO
K03578
ATP-dependent RNA helicase HrpA [EC:
5.6.2.6
]
Organism
kau
Kitasatospora aureofaciens
Brite
KEGG Orthology (KO) [BR:
kau00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kau03019
]
B6264_10535
Enzymes [BR:
kau01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.6 RNA 3'-5' helicase
B6264_10535
Messenger RNA biogenesis [BR:
kau03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
B6264_10535
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF3418
OB_NTP_bind
Helicase_C
HA2_C
DEAD
AAA_19
HA2_N
AAA_22
nSTAND3
AAA_16
NNH7
T2SSE
NACHT
PhoH
DUF6893
AAA_30
Motif
Other DBs
NCBI-ProteinID:
ARF79294
UniProt:
A0A1E7N3F7
LinkDB
All DBs
Position
2440649..2444629
Genome browser
AA seq
1326 aa
AA seq
DB search
MPAVSSPAVQSAPVPAEGPGIGELAARLPELTLRDEVRIGRRLEGARRVRKPEARQKIAA
EIAADIDRAELLVEQRRGAVPKITYPAELPVSQKKDDILEAIRDHQVVIVAGETGSGKTT
QIPKICLELGRGVRGLVGHTQPRRIAARTVAERVAEELDTPLGEAVGWKVRFTDQVGQDT
LVKLMTDGILLAEIQTDRDLRQYDTLIIDEAHERSLNIDFLLGYLKQLLPRRPDLKVVIT
SATIDPERFSRHFGDAPIIEVSGRTYPVEVRYRPVIDDGEDEADEADRDRDQIQAICDAA
QELQDEGPGDILVFLSGEREIRDTADALTKLKLRNTEVLPLYARLSSAEQHRVFQRSNLR
RIVLATNVAETSLTVPGIKYVIDPGTARISRYSHRTKVQRLPIEAISQASANQRKGRCGR
TSDGICIRLYSEEDFLSRPEFTDAEILRTNLASVILQMTAAGLGDISAFPFLDPPDSRNI
KDGVHLLHELGALDPDEKDPRKRLTALGRKLAQLPVDPRMARMVLEADRNGCVRDVMVIA
AALSIQDPRERPAEKRQAADERHRRFSSETSDFLSYLAMWRYVREQQKELSSSAFRRMCK
SEFLNYLRIREWQDVYTQLRTVAKQLGVTIEEPHPDAEPDADRIHQSLLAGLLSHIGLFD
VEKREYGGARGARFAVFPGSGLFKKPPRWVMSAELVETSRLWARINARIEPEWVEPLAGH
LIKRSYSEPHWEKKAGAVLAYEKVTLYGMPIVAQRKVNYGRIDPELCRELFIRNALVEGD
WETHHRFFAENRKLLGEVEELENRARRRDILVDDQTLFDFYDARLPDEVVSTRHFDSWWK
KARHEQPDLLNFEKSMLINDAADGVTEADYPDYWQQGKLRFKLTYQFEPGSDADGVTVHI
PLPVLNQVTAEGFDWQIPGLREELVTAYIKSLPKAIRRNFVPAPDFAKAALRQVKDRQEP
LLPSLEHALKRLTAVTVPPEAWDDERVPEHLKVTFRVVDGKRRLAESKDLEELRLKLKPK
LKETLSSAASGKGIEQSGLTAWPAGLPVLQRTFEQRSRGHSLRAYPALVDEGSSVGVKLF
DTPEAQAHAMWEGTRRLLMLTTTSPAKSIQGRLGNQAKLALSHSPHGSINALFEDVVSAA
TDRLMALAGGPAWDEAAFGKLHDKVRADLYDLSADTTLKTATALIAFHKASTRLKSVSSP
VLLNAVNDVRLHLASLVHPGFVTATGWQRLPDLKRYLLAVDRRLEALPNHPQRDAQQLLK
VQQVQQAYGELLAAVPPGRQPSEEVRAIRWMIEELRVSFFAQSLGTPSPVSEKRIMKAME
AARATL
NT seq
3981 nt
NT seq
+upstream
nt +downstream
nt
atgcccgcagtgagttctcccgcagtccagtccgcccccgtacccgccgagggtcccgga
atcggtgagctggccgcccgcctgcccgagctgaccctgcgcgacgaggtgcggatcggg
cgccggctggagggggcccgcagggtccgcaaacccgaggccaggcagaagatcgccgcc
gagatcgccgccgacatcgaccgcgccgagctgctggtcgagcagcgccggggcgccgtg
ccgaagatcacgtacccggccgagcttccggtcagccagaagaaggacgacatcctggag
gccatccgggaccaccaggtggtgatcgtcgcaggtgagaccgggtccggcaagaccacc
cagatcccgaagatctgcctggagctgggccgtggcgtgcgcggtctggtcggtcacacc
cagccgcgccggatcgccgcccgtacggtggccgagcgcgtcgcggaggagctggacacc
ccgctcggcgaggcggtcggctggaaggtccggttcaccgaccaggtcggccaggacacc
ctggtcaagctgatgacggacggcatcctgctggcggagatccaaaccgaccgcgatctg
cgccagtacgacaccctgatcatcgacgaggcgcacgagcgcagcctcaacatcgacttc
ctgctcggctacctcaagcagctgctcccccgccgccccgacctcaaggtcgtgatcacc
tccgcgacgatcgaccccgagcgcttctcccggcacttcggcgacgctccgatcatcgag
gtctccggccggacgtaccccgtcgaggtccgctaccgcccggtgatcgacgacggcgag
gacgaggccgacgaggcggaccgcgaccgcgaccagatccaggcgatctgcgacgccgcc
caggaactgcaggacgagggcccgggcgacatcctggtcttcctctccggcgagcgcgag
atccgcgacaccgccgacgccctcaccaagctgaagctgaggaacaccgaggtcctcccg
ctctacgcccgcctcagctcggccgagcagcaccgggtgttccagcgctccaacctgcgc
cggatcgtgctggccaccaacgtggccgagacctcgctgaccgtccccggcatcaagtac
gtgatcgacccgggcaccgcccggatctcccgctacagccaccgcaccaaggtgcagcgg
ctgccgatcgaggcgatcagccaggccagcgccaaccagcgcaagggccgctgcggccgc
acctcggacggcatctgcatccggctgtactcggaggaggacttcctctcccgccccgag
ttcaccgacgccgagatcctgcgcaccaacctcgcctcggtgatcctccagatgaccgcg
gccggcctgggcgacatctccgccttcccgttcctggacccgccggactcgcgcaacatc
aaggacggcgtccacctgctgcacgagctgggcgcgctggacccggacgagaaggacccg
cgcaagcgcctgaccgcgctcggccgcaagctcgcccagctcccggtggacccgcggatg
gcccgcatggtgctggaggcggaccgcaacggctgcgtgcgcgacgtcatggtgatcgcc
gccgcgctgtccatccaggacccgcgcgagcgccccgccgagaagcgccaggccgccgac
gagcggcaccgccggttctcctcggagacctcggacttcctctcctacctggcgatgtgg
cgctacgtccgggagcagcagaaggagctctcctcctcggcgttccgccggatgtgcaag
tcggagttcctcaactacctgcggatacgggagtggcaggacgtctacacccagctgcgc
accgtcgccaagcagttgggggtgacgatcgaggagcctcaccccgatgccgagccggac
gccgaccggatccaccagtcgctgctggccgggctgctctcccacatcggcctgttcgac
gtggagaagcgcgagtacggcggcgcccgcggcgcccgcttcgcggtcttcccgggctcc
ggcctgttcaagaagcccccgcgctgggtgatgtcggccgagctggtggagacctcccgg
ctgtgggcccggatcaacgcgaggatcgagcccgagtgggtcgagccgctggccgggcac
ctgatcaagcgcagctacagcgagccgcactgggagaagaaggccggcgccgtgctggcg
tacgagaaggtgaccctctacgggatgccgatcgtcgcccagcgcaaggtcaactacggc
cggatcgacccggagctctgccgcgagctgttcatccgcaacgcgctggtcgagggcgac
tgggagacccaccaccggttcttcgccgagaaccgcaagctgctcggcgaggtcgaggag
ctggagaaccgggcccgccgccgggacatcctggtggacgaccagaccctgttcgacttc
tacgacgcccggctgcccgacgaggtcgtctccacccggcacttcgactcctggtggaag
aaggcccggcacgagcagccggacctgctgaacttcgagaagtcgatgctgatcaacgac
gccgcggacggcgtcaccgaggccgactacccggactactggcagcagggcaagctgcgc
ttcaagctgacctaccagttcgagccgggcagcgacgcggacggcgtgaccgtccacatc
ccgctgccggtgctcaaccaggtcaccgcggagggcttcgactggcagatccccggcctg
cgggaggagctggtcaccgcgtacatcaagtcgctgcccaaggcgatccggcgcaacttc
gtgccggccccggacttcgccaaggcggccctgcgccaggtgaaggaccgccaggagccc
ttgctgccgtccctggagcacgccctgaagcgcctgacggccgtcacggtgccgccggag
gcctgggacgacgagcgggtgccggaacacctcaaggtgaccttccgggtggtggacggc
aagcgcaggctcgccgagtccaaggacctggaggagctgcggctgaagctcaagcccaag
ctcaaggagacgctctcctctgcagcctccggcaagggcatcgagcagagcggcctgacc
gcctggccggccgggctgccggtgctccagcgcaccttcgagcagcgctcgcgcggccat
tcgctgcgcgcctacccggcgctggtggacgagggctcctcggtgggcgtgaagctgttc
gacaccccggaggcccaggcccacgcgatgtgggaggggacgcgccgactgctgatgctg
accaccacctccccggccaagtcgatccagggccggctgggcaaccaggcgaagctggcg
ctctcgcacagcccgcacggctcgatcaacgccctgttcgaggacgtcgtctcggccgcg
acggaccggctgatggccctggccggcggcccggcctgggacgaggcggccttcggcaag
ctgcacgacaaggtgcgggcggacctgtacgacctgtccgcggacaccacgctgaagacg
gccaccgcgctgatcgccttccacaaggcctcgacccggctgaagtcggtgagcagccca
gtgctgctgaacgcggtgaacgacgtccggctgcacctggcctcgctggtgcacccgggc
ttcgtgacggccaccggctggcagcggctgcccgacctcaagcgctacctgctggcggtg
gaccgccggctggaggcgctgcccaaccacccgcagcgggacgcccagcagctgctgaag
gtccagcaggtgcagcaggcgtacggggagctgctggcggccgtaccgcccgggcggcag
ccctccgaagaggtgcgggcgatccgctggatgatcgaggagctgcgggtcagcttcttc
gcccagtcgctgggcacgccgagcccggtctcggagaagcggatcatgaaggcgatggag
gcggcccgggcgaccctgtga
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