Kitasatospora aureofaciens: B6264_20020
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Entry
B6264_20020 CDS
T05021
Name
(GenBank) AraC family transcriptional regulator
KO
K13529
AraC family transcriptional regulator, regulatory protein of adaptative response / DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
kau
Kitasatospora aureofaciens
Pathway
kau03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
kau00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
B6264_20020
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
kau03000
]
B6264_20020
03400 DNA repair and recombination proteins [BR:
kau03400
]
B6264_20020
Enzymes [BR:
kau01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
B6264_20020
Transcription factors [BR:
kau03000
]
Prokaryotic type
Helix-turn-helix
AraC family
B6264_20020
DNA repair and recombination proteins [BR:
kau03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
B6264_20020
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AlkA_N
Ada_Zn_binding
HTH_18
HTH_AraC
HhH-GPD
HHH
Motif
Other DBs
NCBI-ProteinID:
ARF80893
LinkDB
All DBs
Position
4537212..4538873
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AA seq
553 aa
AA seq
DB search
MSDSRQSPPRRCRRLDSVIDDDIRYRAVDSRDSRFDGVFFTAVTSTGIYCRPSCPAVTPK
RANCRFYPSAAAAQGAGFRACRRCRPDSVPGSPEWNHRADLVGRAMRLIGDGVVDREGVA
GLAGRLGYSARQLQRQLIAELGAGPIALARARRAQTARLLLQTTELPVTDIAFAAGFASV
RQFNDTVREVYDRTPSGLRAEVVAGRRTATPAGGLTLRLAYRGAIDSDHLIDFLGLRAVP
GVEEVVPGARPGVRTYRRTLALPYGHGIAEVDGLAPDDPRTRGWLDCRLLLADLRDLPTA
VQRLRILFDLDADPDAVDDQLGADPVLGPLVRERPGLRSPGHVDPHELAVRAVLGQQITV
GAARTLAGRLAERYGAALPEPSGGLRLLFPTSAALATADPEDFAMPAARRRALTGLCAAL
AEGVVRLDGGVDREAAAAQLLALPGIGPWTVGYLRMRALADPDVFLPSDIGVKHGLIRLG
APGDPKAAALAAEAWAPWRSYAVHRLWAGPVSAAPGGVGTGTGTGTGADTGTGTETGSST
SFSTSTGTENDPA
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atgtccgattcccgccagtcgccccctcgtcggtgccgcagactggacagcgtgatcgac
gacgacatccggtaccgagccgtggacagccgggactcccgcttcgacggggtcttcttc
acggccgtcacctccaccggcatctactgccgaccgagttgccccgccgtgaccccgaag
cgtgccaactgccgcttctaccccagtgccgcggccgctcaaggcgccgggttccgggcc
tgccgccgttgccgaccggattccgtgcccggctccccggagtggaaccaccgcgccgac
ctggtcggccgcgcgatgcgcctgatcggcgacggcgtggtggaccgcgagggcgtcgcg
ggcctggccggtcggctcggctacagcgcgcggcagctgcagcgccagctcatcgccgag
ctcggcgccggcccgatcgcgttggcccgcgcccgccgcgcccagaccgcccggctgctc
ctgcagaccaccgagctgcccgtcacggacatcgcgttcgcggccgggttcgcctccgtc
cgccagttcaacgacaccgtccgggaggtctacgaccgcacccccagcggcctgcgcgcc
gaggtcgtggcgggccgccgcaccgcgaccccggccggcggcctcaccctgcgcctggcc
taccgcggcgcgatcgacagcgaccacctgatcgacttcctcggactgcgcgccgtcccc
ggggtggaggaggtcgtgcccggcgcgcgccccggcgtgcgcacctaccggcgcaccctc
gcgctcccgtacggtcacggcatcgccgaggtggacggcctggctccggacgacccgcgc
acccgcggctggctcgactgccgcctgttgctcgccgacctgcgcgacctgccgaccgcc
gtccagcgcctgcgcatcctgttcgacctggacgccgaccccgacgccgtcgacgaccag
ctcggcgccgacccggtgctcggcccgctggtccgggagcgccccggtctgcgctcgccc
ggacatgtggatccgcacgagctggccgtccgcgccgtgctcggccagcagatcaccgtc
ggcgccgcccgtactctggcgggccggctcgcggagaggtacggcgccgcgctgcccgaa
ccgagcggtggcctgcggctgctcttccccacgtcggcggcgctggcgaccgccgacccc
gaggacttcgcgatgcctgcggcccgtcgccgcgcgctcaccggcctgtgcgcggcgctg
gccgagggcgtggtgcggctggacggcggggtggaccgggaggcagccgccgcccagctg
ttggcgttgcccggcatcggcccgtggacggtcggctacctgcggatgcgcgccctcgcc
gaccccgacgtcttcctcccgagcgacatcggcgtcaagcacggcctgatccggctcggt
gcccccggtgacccgaaggccgccgccctcgccgccgaggcctgggccccgtggcgctcc
tacgccgtccaccggctgtgggccgggcccgtgagcgccgccccgggcggcgtcggaacg
ggaaccggcaccggcaccggagccgacacaggcactggcaccgaaaccggatccagcacc
agcttcagcaccagcaccggaacggagaacgacccggcatga
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