Kozakia baliensis: A0U89_07185
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Entry
A0U89_07185 CDS
T04547
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
kba
Kozakia baliensis
Pathway
kba03420
Nucleotide excision repair
kba03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
kba00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
A0U89_07185
03430 Mismatch repair
A0U89_07185
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
kba03400
]
A0U89_07185
Enzymes [BR:
kba01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
A0U89_07185
DNA repair and recombination proteins [BR:
kba03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
A0U89_07185
MMR (mismatch excision repair)
Other MMR factors
A0U89_07185
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
UvrD_C_2
PcrA_UvrD_tudor
Viral_helicase1
AAA_11
Tudor_1_RapA
AAA_22
DUF3553
AAA_16
Motif
Other DBs
NCBI-ProteinID:
AOX16961
UniProt:
A0A1D8UTI7
LinkDB
All DBs
Position
complement(1544552..1546771)
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AA seq
739 aa
AA seq
DB search
MTQSPIPSPRSTLEYLERLNPEQREAIETTEGPLLILAGAGTGKTRVLTTRFAHLLLTGC
ARPHQILAVTFTNKAAREMRERVGALLGESVEGLWLGTFHSICARMLRRHAEYVGLTSGF
TILDTDDQLRLVKQVMEPFRIDTKRWPAQGMLGVIQRWKDRGLTPERVTPAEDSDFGGGG
HARKIYAAYQARLIAVNACDFGDLMLHTTEILRTRPDVLAQYHRLFRYILVDEYQDTNTI
QYLWLRLLAKREGQPANIACVGDDDQSIYSWRGAEVENILRFERDFPGAKVVRLERNYRS
TAQILAAAAGLIAHNDGRLGKTLRPGREDAHGEKVQIIGVWDSDEEARIVAGAIERLKVD
GHPLSEIAILMRAGFQTRPFEERLMTLGLPYRVVGGLRFYERAEIRDAMAYMRVLAQPAD
DLAFERIVNVPRRGVGAAALQKLHVEARALNGPLSLTVSEGLARGNLKGKSREALRVLME
AFDKARETLPREGHVVAVEQLLEDSGYLQMWRDDKSPEAPGRLDNIKELLRAIGDFQSLE
GFLEHVALVTEAEESAAEDKISLMTLHGAKGLEFDTVFLPGWEEGVFPSQRSMDEGGQKS
LEEERRLAYVGLTRARRRAVVVHAARRRVYANWQDSIPSRFIEEIPDEHVQHSGQSFQER
KQAAHVSVFASGPLRSMRPVPKVTDVLDAPRVDIPVGARVFHQKFGYGVVTGVDSDRLHI
TFEKAGEKRVMAQFVELAS
NT seq
2220 nt
NT seq
+upstream
nt +downstream
nt
gtgacgcaatcccctatcccatctccgcgctcgacactcgagtatcttgaacgcttgaat
cccgaacagcgtgaagcaatcgagacgacggaaggcccgttattgattctcgcaggtgcg
ggaaccggcaagacgcgcgttttgacgactcgtttcgcgcatctgcttctgacgggctgc
gcgcgaccgcatcagattctggcggtgacgttcaccaacaaggctgcgcgcgaaatgcgc
gagcgtgtaggtgcgttgctaggcgagtccgtcgaagggttatggctgggcacgttccat
tccatttgcgcgcggatgctgcggcgtcatgccgaatatgtcgggctgacgagtgggttc
acaattctggatacggacgatcaactgcgtttggtgaagcaggtgatggagccgtttcgt
atcgacaccaagcgctggcctgctcaaggaatgcttggcgttatccagcgttggaaagat
cgcgggttaacgccggagcgcgtgacgcctgctgaggacagcgattttggcggtggtggc
cacgcgcgcaagatttatgcggcataccaggcgcgtttgatcgcggtgaatgcctgcgat
ttcggcgatctgatgctgcatacgacggagatattgcgcacgcggccggatgttctcgcg
cagtatcaccgcttgtttcgttatattctggtggacgagtatcaggacaccaacaccatt
caatacctctggctgcgtctcctggccaagcgcgagggacaacctgctaacattgcctgt
gtgggcgatgacgatcagtcgatctattcctggcgtggggcggaagtagagaacattctg
cgtttcgagcgggatttccctggcgcgaaggtcgtgcgcctggagcggaactaccgttcg
accgcgcagattctggcggcggcggcggggctaattgcgcataatgacgggcgtttaggc
aagacgttgcgcccggggcgcgaggatgcgcacggcgagaaagtgcaaatcatcggggtt
tgggactccgatgaggaagcgcggatcgttgccggggcgatcgaacgattgaaggtggat
gggcatccgctttccgagatcgccattctcatgcgcgcgggctttcagacacgcccgttc
gaagagcgtttgatgacgctgggcctaccttatcgggtggtgggtggtctgcgcttttac
gagcgggcggaaatccgtgacgccatggcttatatgcgtgttttggcgcagccggcggac
gatctggcgtttgagcgcatcgtcaatgtgccgcgtcgtggtgtgggggctgcggctttg
cagaagcttcacgtcgaggcgcgcgcattgaatgggccgttaagcctaacggtgtctgag
ggtctggcgcgcggaaacttgaaaggtaaatcgcgcgaggccctgcgcgtgttgatggag
gctttcgacaaagcgcgtgagacattgccgcgtgaggggcatgttgtggcggtagagcaa
ttgctggaggattctggctatttgcaaatgtggcgagacgataaatcgccagaagcgccg
ggccggctagacaatatcaaggaattgctgcgggccattggggatttccaatccctggag
ggtttccttgagcatgtagcgttggtgacggaagccgaggaaagcgctgcggaagacaaa
atcagcctaatgacgctgcatggcgcgaagggtttggagttcgacacggtgtttctgccc
ggttgggaagaaggcgtatttccctcccaacgcagtatggatgaaggcgggcagaagagc
ttagaggaagagcggcgtctggcttatgtcgggctgacgcgggcgcgtagacgcgcagtt
gtggtgcatgcggcgcgtcgtcgggtttacgccaattggcaggattcgattcccagtcgg
ttcattgaggaaattcctgatgagcatgtgcagcatagcggacaatcgtttcaggagcga
aaacaggcagcgcatgtttcggtgtttgcgtccgggccgttacgcagtatgcggcctgtt
cctaaagtgacggatgttttggatgcgccgcgtgttgatattccggtcggggcgcgcgta
ttccatcagaaattcggttatggcgttgtcacgggtgtggatagcgaccgactgcatatt
actttcgagaaggctggcgaaaagcgcgtgatggctcaatttgtggaactagcgtcgtga
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